Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Gm6829-201ENSMUST00000119858 360 ntBASIC4.36□□□□□ -1.71
RaraP11416 Gm12195-201ENSMUST00000144990 469 ntTSL 3 BASIC4.36□□□□□ -1.71
RaraP11416 Gm27535-201ENSMUST00000183814 157 ntBASIC4.36□□□□□ -1.71
RaraP11416 Mir6938-201ENSMUST00000184173 63 ntBASIC4.36□□□□□ -1.71
RaraP11416 Gm37836-201ENSMUST00000195875 175 ntBASIC4.36□□□□□ -1.71
RaraP11416 Igkv13-78-1-201ENSMUST00000199298 200 ntBASIC4.36□□□□□ -1.71
RaraP11416 1700014F14Rik-201ENSMUST00000199566 197 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
RaraP11416 Gm43925-201ENSMUST00000203498 206 ntBASIC4.36□□□□□ -1.71
RaraP11416 2500002B13Rik-202ENSMUST00000210752 298 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
RaraP11416 CT030247.1-201ENSMUST00000216810 267 ntBASIC4.36□□□□□ -1.71
RaraP11416 AC140785.1-201ENSMUST00000217782 383 ntBASIC4.36□□□□□ -1.71
RaraP11416 AC165293.1-201ENSMUST00000219669 329 ntBASIC4.36□□□□□ -1.71
RaraP11416 AC154282.1-201ENSMUST00000223154 265 ntBASIC4.36□□□□□ -1.71
RaraP11416 CT010506.3-201ENSMUST00000223699 410 ntBASIC4.36□□□□□ -1.71
RaraP11416 CT010511.1-201ENSMUST00000224570 315 ntBASIC4.36□□□□□ -1.71
RaraP11416 Defb50-201ENSMUST00000078879 373 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
RaraP11416 Gm24948-201ENSMUST00000082866 207 ntBASIC4.36□□□□□ -1.71
RaraP11416 Gm22828-201ENSMUST00000083768 107 ntBASIC4.36□□□□□ -1.71
RaraP11416 Olfr1270-202ENSMUST00000213946 4930 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
RaraP11416 Skint3-201ENSMUST00000038455 3627 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
RaraP11416 Vmn2r93-201ENSMUST00000079206 2574 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
RaraP11416 0610010F05Rik-201ENSMUST00000043356 4392 ntAPPRIS P2 TSL 5 BASIC4.36□□□□□ -1.71
RaraP11416 Fgd4-206ENSMUST00000161861 8342 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
RaraP11416 Olfr38-202ENSMUST00000215796 2782 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
RaraP11416 Vmn2r32-201ENSMUST00000094866 3513 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
RaraP11416 Gm37941-201ENSMUST00000192170 2309 ntBASIC4.35□□□□□ -1.71
RaraP11416 Olfr418-202ENSMUST00000213420 4388 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
RaraP11416 Gm38269-201ENSMUST00000194549 3298 ntBASIC4.35□□□□□ -1.71
RaraP11416 Gm14816-201ENSMUST00000117174 294 ntBASIC4.35□□□□□ -1.71
RaraP11416 Gm13992-201ENSMUST00000120558 156 ntBASIC4.35□□□□□ -1.71
RaraP11416 1700119I11Rik-201ENSMUST00000122270 336 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
RaraP11416 Gm15350-201ENSMUST00000135138 569 ntTSL 2 BASIC4.35□□□□□ -1.71
RaraP11416 Gm5967-201ENSMUST00000172723 494 ntBASIC4.35□□□□□ -1.71
RaraP11416 Gm27285-201ENSMUST00000183875 127 ntBASIC4.35□□□□□ -1.71
RaraP11416 A930005H10Rik-202ENSMUST00000185424 433 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
RaraP11416 Gm37754-201ENSMUST00000194406 452 ntTSL 5 BASIC4.35□□□□□ -1.71
RaraP11416 Gm43441-201ENSMUST00000201458 205 ntBASIC4.35□□□□□ -1.71
RaraP11416 CT010449.1-201ENSMUST00000220624 153 ntBASIC4.35□□□□□ -1.71
RaraP11416 AC158955.1-201ENSMUST00000227140 385 ntBASIC4.35□□□□□ -1.71
RaraP11416 Gm25651-201ENSMUST00000083782 119 ntBASIC4.35□□□□□ -1.71
RaraP11416 Nap1l1-202ENSMUST00000171797 3926 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
RaraP11416 Nap1l1-204ENSMUST00000218828 3934 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
RaraP11416 Adam26a-201ENSMUST00000049577 2489 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
RaraP11416 Gm37862-201ENSMUST00000193079 2533 ntBASIC4.35□□□□□ -1.71
RaraP11416 Gm6639-202ENSMUST00000196841 2666 ntTSL 5 BASIC4.35□□□□□ -1.71
RaraP11416 AC152159.1-201ENSMUST00000226719 2769 ntBASIC4.35□□□□□ -1.71
RaraP11416 Olfr149-202ENSMUST00000215192 2806 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
RaraP11416 Vmn1r185-213ENSMUST00000228676 5199 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
RaraP11416 Gm42991-201ENSMUST00000196468 3837 ntBASIC4.34□□□□□ -1.71
RaraP11416 Gm44525-201ENSMUST00000183129 2634 ntBASIC4.34□□□□□ -1.71
RaraP11416 Gm44682-201ENSMUST00000208501 2614 ntBASIC4.34□□□□□ -1.71
RaraP11416 A630033H20Rik-201ENSMUST00000067249 3004 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
RaraP11416 Gm37236-201ENSMUST00000193670 3249 ntBASIC4.34□□□□□ -1.71
RaraP11416 Vmn1r22-202ENSMUST00000227650 3674 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
RaraP11416 Sorbs2-203ENSMUST00000124544 3798 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
RaraP11416 Gm14922-201ENSMUST00000121131 163 ntBASIC4.34□□□□□ -1.71
RaraP11416 Gm11931-201ENSMUST00000121630 447 ntBASIC4.34□□□□□ -1.71
RaraP11416 Gm14473-201ENSMUST00000122269 557 ntBASIC4.34□□□□□ -1.71
RaraP11416 Gm13092-201ENSMUST00000136346 260 ntBASIC4.34□□□□□ -1.71
RaraP11416 Gm25965-201ENSMUST00000157170 93 ntBASIC4.34□□□□□ -1.71
RaraP11416 Gm22561-201ENSMUST00000157331 84 ntBASIC4.34□□□□□ -1.71
RaraP11416 Gm26036-201ENSMUST00000158149 144 ntBASIC4.34□□□□□ -1.71
RaraP11416 Gm7909-201ENSMUST00000182688 614 ntBASIC4.34□□□□□ -1.71
RaraP11416 Gm7497-201ENSMUST00000183064 1003 ntBASIC4.34□□□□□ -1.71
RaraP11416 Gm27875-201ENSMUST00000184425 123 ntBASIC4.34□□□□□ -1.71
RaraP11416 Gm37097-201ENSMUST00000193676 336 ntBASIC4.34□□□□□ -1.71
RaraP11416 Gm38332-201ENSMUST00000194189 147 ntBASIC4.34□□□□□ -1.71
RaraP11416 Gm37617-201ENSMUST00000194309 159 ntBASIC4.34□□□□□ -1.71
RaraP11416 Gm43193-201ENSMUST00000197732 441 ntBASIC4.34□□□□□ -1.71
RaraP11416 Gm24152-201ENSMUST00000082764 163 ntBASIC4.34□□□□□ -1.71
RaraP11416 Olfr810-204ENSMUST00000217283 4527 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
RaraP11416 Efhc2-201ENSMUST00000026014 2554 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
RaraP11416 Fam19a1-202ENSMUST00000122120 3252 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
RaraP11416 AC124346.2-201ENSMUST00000217986 5083 ntBASIC4.34□□□□□ -1.72
RaraP11416 Vmn1r43-205ENSMUST00000228709 12646 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
RaraP11416 Olfr1274-ps-202ENSMUST00000216111 3395 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
RaraP11416 Olfr1249-202ENSMUST00000216124 3047 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
RaraP11416 Ugp2-202ENSMUST00000102875 2683 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
RaraP11416 Mir466p-201ENSMUST00000103925 89 ntBASIC4.33□□□□□ -1.72
RaraP11416 Gm24116-201ENSMUST00000103975 107 ntBASIC4.33□□□□□ -1.72
RaraP11416 Gm12793-201ENSMUST00000119268 292 ntBASIC4.33□□□□□ -1.72
RaraP11416 Gm7618-201ENSMUST00000121643 171 ntBASIC4.33□□□□□ -1.72
RaraP11416 Gm11204-201ENSMUST00000122438 147 ntBASIC4.33□□□□□ -1.72
RaraP11416 n-R5s216-201ENSMUST00000122755 112 ntBASIC4.33□□□□□ -1.72
RaraP11416 Gm15537-201ENSMUST00000126677 485 ntTSL 2 BASIC4.33□□□□□ -1.72
RaraP11416 Gm12325-201ENSMUST00000135553 320 ntTSL 5 BASIC4.33□□□□□ -1.72
RaraP11416 Gm23466-201ENSMUST00000157133 106 ntBASIC4.33□□□□□ -1.72
RaraP11416 Gm17571-201ENSMUST00000167906 90 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
RaraP11416 Mir669k-201ENSMUST00000177742 127 ntBASIC4.33□□□□□ -1.72
RaraP11416 Mir466b-1-201ENSMUST00000177988 82 ntBASIC4.33□□□□□ -1.72
RaraP11416 Gm23215-201ENSMUST00000178153 121 ntBASIC4.33□□□□□ -1.72
RaraP11416 Gm25673-201ENSMUST00000179957 127 ntBASIC4.33□□□□□ -1.72
RaraP11416 Mir465d-201ENSMUST00000196314 58 ntBASIC4.33□□□□□ -1.72
RaraP11416 AC158798.1-201ENSMUST00000219714 711 ntTSL 5 BASIC4.33□□□□□ -1.72
RaraP11416 Ccl5-201ENSMUST00000035938 532 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
RaraP11416 Vmn1r174-202ENSMUST00000228331 9058 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
RaraP11416 Vmn1r71-205ENSMUST00000227940 4725 ntAPPRIS P2 BASIC4.33□□□□□ -1.72
RaraP11416 AC154634.4-201ENSMUST00000226077 2665 ntBASIC4.33□□□□□ -1.72
RaraP11416 Casp12-201ENSMUST00000027009 2649 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
RaraP11416 Olfr706-202ENSMUST00000213918 4828 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 89.6 ms