Protein–RNA interactions for Protein: P08121

Col3a1, Collagen alpha-1(III) chain, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1P08121 Gm23214-201ENSMUST00000122716 157 ntBASIC3.14□□□□□ -1.91
Col3a1P08121 Gm25334-201ENSMUST00000158036 110 ntBASIC3.14□□□□□ -1.91
Col3a1P08121 Gm22839-201ENSMUST00000158436 304 ntBASIC3.14□□□□□ -1.91
Col3a1P08121 Gm8207-201ENSMUST00000171204 502 ntBASIC3.14□□□□□ -1.91
Col3a1P08121 Vmn2r-ps116-201ENSMUST00000175997 126 ntBASIC3.14□□□□□ -1.91
Col3a1P08121 Gm27699-201ENSMUST00000183553 180 ntBASIC3.14□□□□□ -1.91
Col3a1P08121 Gm19427-201ENSMUST00000183619 208 ntBASIC3.14□□□□□ -1.91
Col3a1P08121 Gm28724-202ENSMUST00000194218 295 ntBASIC3.14□□□□□ -1.91
Col3a1P08121 Gm19202-201ENSMUST00000198096 808 ntBASIC3.14□□□□□ -1.91
Col3a1P08121 Gm43600-201ENSMUST00000202134 223 ntBASIC3.14□□□□□ -1.91
Col3a1P08121 Olfr1114-ps1-201ENSMUST00000213896 456 ntBASIC3.14□□□□□ -1.91
Col3a1P08121 CT030184.1-201ENSMUST00000222393 416 ntBASIC3.14□□□□□ -1.91
Col3a1P08121 Gm24610-201ENSMUST00000083270 109 ntBASIC3.14□□□□□ -1.91
Col3a1P08121 Olfr152-201ENSMUST00000090709 951 ntAPPRIS P2 BASIC3.14□□□□□ -1.91
Col3a1P08121 Slain1os-201ENSMUST00000160117 3101 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
Col3a1P08121 Naaladl2-202ENSMUST00000203414 9330 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Col3a1P08121 Gm8675-201ENSMUST00000201408 1856 ntBASIC3.13□□□□□ -1.91
Col3a1P08121 Olfr935-202ENSMUST00000214157 1693 ntAPPRIS P1 TSL 3 BASIC3.13□□□□□ -1.91
Col3a1P08121 Gm24670-201ENSMUST00000104154 132 ntBASIC3.13□□□□□ -1.91
Col3a1P08121 Gm12765-201ENSMUST00000117273 615 ntBASIC3.13□□□□□ -1.91
Col3a1P08121 Gm12053-201ENSMUST00000119022 252 ntBASIC3.13□□□□□ -1.91
Col3a1P08121 Gm15177-201ENSMUST00000120491 577 ntBASIC3.13□□□□□ -1.91
Col3a1P08121 Gm13511-201ENSMUST00000121167 363 ntBASIC3.13□□□□□ -1.91
Col3a1P08121 Gm14804-201ENSMUST00000122322 508 ntBASIC3.13□□□□□ -1.91
Col3a1P08121 Gm23206-201ENSMUST00000122720 184 ntBASIC3.13□□□□□ -1.91
Col3a1P08121 Ppp1r2-ps7-201ENSMUST00000140102 609 ntBASIC3.13□□□□□ -1.91
Col3a1P08121 Zfp950-205ENSMUST00000148569 192 ntTSL 5 BASIC3.13□□□□□ -1.91
Col3a1P08121 Gm26352-201ENSMUST00000158223 125 ntBASIC3.13□□□□□ -1.91
Col3a1P08121 Gm8161-201ENSMUST00000168739 481 ntBASIC3.13□□□□□ -1.91
Col3a1P08121 Ifi206-202ENSMUST00000169797 429 ntTSL 5 BASIC3.13□□□□□ -1.91
Col3a1P08121 Gm20450-201ENSMUST00000173652 147 ntBASIC3.13□□□□□ -1.91
Col3a1P08121 Gm27959-201ENSMUST00000185172 111 ntBASIC3.13□□□□□ -1.91
Col3a1P08121 Gm25820-202ENSMUST00000197479 128 ntBASIC3.13□□□□□ -1.91
Col3a1P08121 Gm45459-201ENSMUST00000209882 442 ntTSL 5 BASIC3.13□□□□□ -1.91
Col3a1P08121 Olfr1266-ps1-201ENSMUST00000214850 180 ntBASIC3.13□□□□□ -1.91
Col3a1P08121 AC138290.2-201ENSMUST00000218822 369 ntBASIC3.13□□□□□ -1.91
Col3a1P08121 CT030187.1-201ENSMUST00000220605 252 ntBASIC3.13□□□□□ -1.91
Col3a1P08121 Gm20102-201ENSMUST00000222445 220 ntBASIC3.13□□□□□ -1.91
Col3a1P08121 AC141884.1-201ENSMUST00000226327 636 ntBASIC3.13□□□□□ -1.91
Col3a1P08121 Gm22229-201ENSMUST00000082987 108 ntBASIC3.13□□□□□ -1.91
Col3a1P08121 Zfp988-201ENSMUST00000148762 2800 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Col3a1P08121 Oog1-203ENSMUST00000222332 1464 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
Col3a1P08121 D3Ertd254e-201ENSMUST00000165956 6503 ntTSL 3 BASIC3.12□□□□□ -1.91
Col3a1P08121 AC157570.1-201ENSMUST00000218052 3778 ntBASIC3.12□□□□□ -1.91
Col3a1P08121 Gm23691-201ENSMUST00000101878 107 ntBASIC3.12□□□□□ -1.91
Col3a1P08121 Ighv9-3-201ENSMUST00000103473 351 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Col3a1P08121 Gm14877-201ENSMUST00000119803 478 ntBASIC3.12□□□□□ -1.91
Col3a1P08121 Gm14815-201ENSMUST00000120060 488 ntBASIC3.12□□□□□ -1.91
Col3a1P08121 Hmgb1-ps5-201ENSMUST00000121058 557 ntBASIC3.12□□□□□ -1.91
Col3a1P08121 4930511O05Rik-201ENSMUST00000155912 391 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Col3a1P08121 Gm23124-201ENSMUST00000157650 107 ntBASIC3.12□□□□□ -1.91
Col3a1P08121 Gm24857-201ENSMUST00000158061 310 ntBASIC3.12□□□□□ -1.91
Col3a1P08121 Gm23179-201ENSMUST00000158693 304 ntBASIC3.12□□□□□ -1.91
Col3a1P08121 Gm25365-201ENSMUST00000158852 121 ntBASIC3.12□□□□□ -1.91
Col3a1P08121 AC154297.1-201ENSMUST00000171334 397 ntBASIC3.12□□□□□ -1.91
Col3a1P08121 Gm25476-201ENSMUST00000175125 185 ntBASIC3.12□□□□□ -1.91
Col3a1P08121 Gm24082-201ENSMUST00000175175 83 ntBASIC3.12□□□□□ -1.91
Col3a1P08121 Gm23793-201ENSMUST00000179396 117 ntBASIC3.12□□□□□ -1.91
Col3a1P08121 Gm27402-201ENSMUST00000183890 120 ntBASIC3.12□□□□□ -1.91
Col3a1P08121 Gm29610-201ENSMUST00000187749 453 ntBASIC3.12□□□□□ -1.91
Col3a1P08121 Gm19498-201ENSMUST00000191128 331 ntBASIC3.12□□□□□ -1.91
Col3a1P08121 Gm38311-201ENSMUST00000192945 165 ntBASIC3.12□□□□□ -1.91
Col3a1P08121 Gm32175-201ENSMUST00000193641 346 ntBASIC3.12□□□□□ -1.91
Col3a1P08121 Gm43574-201ENSMUST00000196226 809 ntTSL 3 BASIC3.12□□□□□ -1.91
Col3a1P08121 Trav14-1-201ENSMUST00000198297 399 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Col3a1P08121 Gm42475-201ENSMUST00000201212 295 ntBASIC3.12□□□□□ -1.91
Col3a1P08121 Gm45911-201ENSMUST00000211844 601 ntTSL 3 BASIC3.12□□□□□ -1.91
Col3a1P08121 Olfr927-ps1-201ENSMUST00000216759 782 ntBASIC3.12□□□□□ -1.91
Col3a1P08121 AC159632.1-201ENSMUST00000221808 317 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Col3a1P08121 AC158982.2-201ENSMUST00000226283 184 ntBASIC3.12□□□□□ -1.91
Col3a1P08121 Gm24622-201ENSMUST00000082619 162 ntBASIC3.12□□□□□ -1.91
Col3a1P08121 1700008P02Rik-201ENSMUST00000091364 783 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Col3a1P08121 Rps24-ps2-201ENSMUST00000091375 395 ntBASIC3.12□□□□□ -1.91
Col3a1P08121 Gm16261-201ENSMUST00000096813 205 ntBASIC3.12□□□□□ -1.91
Col3a1P08121 Vmn2r108-201ENSMUST00000167314 2568 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Col3a1P08121 AC153801.2-201ENSMUST00000219875 3372 ntBASIC3.12□□□□□ -1.91
Col3a1P08121 Gm45039-201ENSMUST00000209181 3477 ntBASIC3.12□□□□□ -1.91
Col3a1P08121 Gm42537-201ENSMUST00000198260 2574 ntBASIC3.12□□□□□ -1.91
Col3a1P08121 4932415D10Rik-202ENSMUST00000217661 15111 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Col3a1P08121 AC125223.3-201ENSMUST00000223588 2067 ntBASIC3.11□□□□□ -1.91
Col3a1P08121 Gm24120-201ENSMUST00000103978 129 ntBASIC3.11□□□□□ -1.91
Col3a1P08121 Gm11219-201ENSMUST00000118565 358 ntBASIC3.11□□□□□ -1.91
Col3a1P08121 Gm11813-201ENSMUST00000118586 291 ntBASIC3.11□□□□□ -1.91
Col3a1P08121 Gm25966-201ENSMUST00000157169 117 ntBASIC3.11□□□□□ -1.91
Col3a1P08121 Gm23538-201ENSMUST00000157535 101 ntBASIC3.11□□□□□ -1.91
Col3a1P08121 Gm23016-201ENSMUST00000158431 62 ntBASIC3.11□□□□□ -1.91
Col3a1P08121 Esp4-201ENSMUST00000178498 553 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Col3a1P08121 Gm26177-201ENSMUST00000178683 107 ntBASIC3.11□□□□□ -1.91
Col3a1P08121 Scgb2b17-202ENSMUST00000182640 420 ntAPPRIS ALT2 TSL 3 BASIC3.11□□□□□ -1.91
Col3a1P08121 Gm27369-201ENSMUST00000185182 71 ntBASIC3.11□□□□□ -1.91
Col3a1P08121 Gm38316-201ENSMUST00000194838 469 ntTSL 5 BASIC3.11□□□□□ -1.91
Col3a1P08121 Klra13-ps-204ENSMUST00000205252 640 ntTSL 3 BASIC3.11□□□□□ -1.91
Col3a1P08121 Gm44521-201ENSMUST00000206469 217 ntBASIC3.11□□□□□ -1.91
Col3a1P08121 Gm45023-201ENSMUST00000207951 379 ntBASIC3.11□□□□□ -1.91
Col3a1P08121 CT025606.1-201ENSMUST00000218273 324 ntBASIC3.11□□□□□ -1.91
Col3a1P08121 AC126554.1-201ENSMUST00000222161 271 ntBASIC3.11□□□□□ -1.91
Col3a1P08121 Gm31025-201ENSMUST00000222553 482 ntTSL 5 BASIC3.11□□□□□ -1.91
Col3a1P08121 AC118639.1-201ENSMUST00000227204 338 ntBASIC3.11□□□□□ -1.91
Col3a1P08121 Olfr747-204ENSMUST00000213238 1416 ntAPPRIS P1 TSL 3 BASIC3.11□□□□□ -1.91
Col3a1P08121 Olfr968-202ENSMUST00000216458 4630 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 100.6 ms