Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Gm23538-201ENSMUST00000157535 101 ntBASIC1.84□□□□□ -2.11
Cx3cl1O35188 Gm8532-201ENSMUST00000179174 461 ntBASIC1.84□□□□□ -2.11
Cx3cl1O35188 Gm25156-201ENSMUST00000179809 79 ntBASIC1.84□□□□□ -2.11
Cx3cl1O35188 Gm10267-202ENSMUST00000181652 341 ntAPPRIS P2 TSL 5 BASIC1.84□□□□□ -2.11
Cx3cl1O35188 Mir6382-201ENSMUST00000184055 110 ntBASIC1.84□□□□□ -2.11
Cx3cl1O35188 Gtpbp4-ps2-201ENSMUST00000184058 256 ntBASIC1.84□□□□□ -2.11
Cx3cl1O35188 Mir6901-201ENSMUST00000185062 62 ntBASIC1.84□□□□□ -2.11
Cx3cl1O35188 Gm29069-201ENSMUST00000185857 675 ntTSL 3 BASIC1.84□□□□□ -2.11
Cx3cl1O35188 Gm28666-201ENSMUST00000186649 274 ntBASIC1.84□□□□□ -2.11
Cx3cl1O35188 Gm28745-201ENSMUST00000190069 305 ntBASIC1.84□□□□□ -2.11
Cx3cl1O35188 Gm28926-201ENSMUST00000191063 680 ntBASIC1.84□□□□□ -2.11
Cx3cl1O35188 Gm7871-201ENSMUST00000195346 618 ntBASIC1.84□□□□□ -2.11
Cx3cl1O35188 Gm18341-201ENSMUST00000197538 622 ntBASIC1.84□□□□□ -2.11
Cx3cl1O35188 AC154296.1-201ENSMUST00000198150 67 ntBASIC1.84□□□□□ -2.11
Cx3cl1O35188 Gm44324-201ENSMUST00000198517 135 ntBASIC1.84□□□□□ -2.11
Cx3cl1O35188 Gm31752-201ENSMUST00000199456 856 ntTSL 2 BASIC1.84□□□□□ -2.11
Cx3cl1O35188 Gm44533-201ENSMUST00000207782 268 ntBASIC1.84□□□□□ -2.11
Cx3cl1O35188 AC160030.1-201ENSMUST00000218916 506 ntTSL 2 BASIC1.84□□□□□ -2.11
Cx3cl1O35188 AC154552.3-201ENSMUST00000220741 444 ntTSL 5 BASIC1.84□□□□□ -2.11
Cx3cl1O35188 AC192616.3-201ENSMUST00000220797 1124 ntBASIC1.84□□□□□ -2.11
Cx3cl1O35188 AC183092.2-201ENSMUST00000225542 1153 ntBASIC1.84□□□□□ -2.11
Cx3cl1O35188 CT009550.5-201ENSMUST00000226286 382 ntBASIC1.84□□□□□ -2.11
Cx3cl1O35188 AC160930.1-201ENSMUST00000227194 337 ntBASIC1.84□□□□□ -2.11
Cx3cl1O35188 Gm23247-201ENSMUST00000083373 107 ntBASIC1.84□□□□□ -2.11
Cx3cl1O35188 Tlr8-201ENSMUST00000049023 3158 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
Cx3cl1O35188 Gm14748-201ENSMUST00000119819 411 ntBASIC1.83□□□□□ -2.12
Cx3cl1O35188 Gm14775-201ENSMUST00000122089 310 ntBASIC1.83□□□□□ -2.12
Cx3cl1O35188 Gm2020-201ENSMUST00000145242 579 ntBASIC1.83□□□□□ -2.12
Cx3cl1O35188 Gm23317-201ENSMUST00000157999 129 ntBASIC1.83□□□□□ -2.12
Cx3cl1O35188 Gm17054-201ENSMUST00000169811 259 ntBASIC1.83□□□□□ -2.12
Cx3cl1O35188 Gm9944-201ENSMUST00000177649 309 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
Cx3cl1O35188 Gm28494-201ENSMUST00000187687 562 ntTSL 5 BASIC1.83□□□□□ -2.12
Cx3cl1O35188 Gm28986-201ENSMUST00000189682 678 ntTSL 5 BASIC1.83□□□□□ -2.12
Cx3cl1O35188 Gm37059-201ENSMUST00000191723 678 ntTSL 5 BASIC1.83□□□□□ -2.12
Cx3cl1O35188 Gm37550-201ENSMUST00000193230 463 ntBASIC1.83□□□□□ -2.12
Cx3cl1O35188 Gm43582-201ENSMUST00000196149 343 ntBASIC1.83□□□□□ -2.12
Cx3cl1O35188 AC159621.1-201ENSMUST00000223249 163 ntBASIC1.83□□□□□ -2.12
Cx3cl1O35188 4930469K13Rik-203ENSMUST00000224226 243 ntAPPRIS ALT2 BASIC1.83□□□□□ -2.12
Cx3cl1O35188 AC129085.5-201ENSMUST00000225468 400 ntBASIC1.83□□□□□ -2.12
Cx3cl1O35188 2010106E10Rik-201ENSMUST00000026602 1257 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
Cx3cl1O35188 Gm23645-201ENSMUST00000083228 108 ntBASIC1.83□□□□□ -2.12
Cx3cl1O35188 Mir93-201ENSMUST00000083593 88 ntBASIC1.83□□□□□ -2.12
Cx3cl1O35188 AC153966.1-201ENSMUST00000220106 3764 ntBASIC1.83□□□□□ -2.12
Cx3cl1O35188 Zfp936-201ENSMUST00000072829 1368 ntTSL 5 BASIC1.83□□□□□ -2.12
Cx3cl1O35188 Zfp273-201ENSMUST00000012725 2277 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
Cx3cl1O35188 Gm25088-201ENSMUST00000101803 79 ntBASIC1.82□□□□□ -2.12
Cx3cl1O35188 Trbv5-201ENSMUST00000103266 368 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
Cx3cl1O35188 Gm24984-201ENSMUST00000104454 133 ntBASIC1.82□□□□□ -2.12
Cx3cl1O35188 Gm12814-201ENSMUST00000117091 846 ntBASIC1.82□□□□□ -2.12
Cx3cl1O35188 Gm13728-201ENSMUST00000117471 400 ntBASIC1.82□□□□□ -2.12
Cx3cl1O35188 Gm14868-201ENSMUST00000117840 216 ntBASIC1.82□□□□□ -2.12
Cx3cl1O35188 Gm12235-201ENSMUST00000118596 170 ntBASIC1.82□□□□□ -2.12
Cx3cl1O35188 Gm25220-201ENSMUST00000157546 95 ntBASIC1.82□□□□□ -2.12
Cx3cl1O35188 Gm25368-201ENSMUST00000158847 131 ntBASIC1.82□□□□□ -2.12
Cx3cl1O35188 1700129C05Rik-203ENSMUST00000162271 325 ntAPPRIS ALT2 TSL 3 BASIC1.82□□□□□ -2.12
Cx3cl1O35188 Vmn2r-ps84-201ENSMUST00000173377 897 ntBASIC1.82□□□□□ -2.12
Cx3cl1O35188 Vmn1r-ps74-201ENSMUST00000173518 570 ntBASIC1.82□□□□□ -2.12
Cx3cl1O35188 Mir3964-201ENSMUST00000174898 74 ntBASIC1.82□□□□□ -2.12
Cx3cl1O35188 Gm23813-201ENSMUST00000175153 77 ntBASIC1.82□□□□□ -2.12
Cx3cl1O35188 Gm21827-201ENSMUST00000178247 423 ntBASIC1.82□□□□□ -2.12
Cx3cl1O35188 Gm4076-201ENSMUST00000179230 965 ntBASIC1.82□□□□□ -2.12
Cx3cl1O35188 Mir6997-201ENSMUST00000184313 71 ntBASIC1.82□□□□□ -2.12
Cx3cl1O35188 Mir7226-201ENSMUST00000184953 60 ntBASIC1.82□□□□□ -2.12
Cx3cl1O35188 Gm28627-201ENSMUST00000186141 453 ntBASIC1.82□□□□□ -2.12
Cx3cl1O35188 Gm37743-201ENSMUST00000194645 376 ntBASIC1.82□□□□□ -2.12
Cx3cl1O35188 Gm43114-201ENSMUST00000198298 343 ntBASIC1.82□□□□□ -2.12
Cx3cl1O35188 Gm44254-201ENSMUST00000204184 322 ntBASIC1.82□□□□□ -2.12
Cx3cl1O35188 Gm44135-201ENSMUST00000205221 368 ntBASIC1.82□□□□□ -2.12
Cx3cl1O35188 Gm18453-201ENSMUST00000208000 626 ntBASIC1.82□□□□□ -2.12
Cx3cl1O35188 Gm18160-201ENSMUST00000214279 827 ntBASIC1.82□□□□□ -2.12
Cx3cl1O35188 Mucl2-201ENSMUST00000037685 639 ntAPPRIS P2 TSL 1 (best) BASIC1.82□□□□□ -2.12
Cx3cl1O35188 Olfr1454-201ENSMUST00000073732 924 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
Cx3cl1O35188 Hmgb1l-201ENSMUST00000082150 571 ntBASIC1.82□□□□□ -2.12
Cx3cl1O35188 Gm25124-201ENSMUST00000083345 164 ntBASIC1.82□□□□□ -2.12
Cx3cl1O35188 Rpl31-ps1-201ENSMUST00000085128 378 ntBASIC1.82□□□□□ -2.12
Cx3cl1O35188 AC162910.1-201ENSMUST00000221219 1723 ntBASIC1.82□□□□□ -2.12
Cx3cl1O35188 Vmn1r83-202ENSMUST00000226701 2788 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
Cx3cl1O35188 Trbj1-4-201ENSMUST00000103287 51 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
Cx3cl1O35188 Gm14899-201ENSMUST00000118673 548 ntBASIC1.81□□□□□ -2.12
Cx3cl1O35188 Gm15312-201ENSMUST00000118827 271 ntBASIC1.81□□□□□ -2.12
Cx3cl1O35188 Gm15309-201ENSMUST00000121644 240 ntBASIC1.81□□□□□ -2.12
Cx3cl1O35188 Scgb1b26-ps-201ENSMUST00000121845 291 ntBASIC1.81□□□□□ -2.12
Cx3cl1O35188 Trav20-201ENSMUST00000142754 347 ntBASIC1.81□□□□□ -2.12
Cx3cl1O35188 Gm25961-201ENSMUST00000157174 135 ntBASIC1.81□□□□□ -2.12
Cx3cl1O35188 Gm25392-201ENSMUST00000157335 297 ntBASIC1.81□□□□□ -2.12
Cx3cl1O35188 Gm23137-201ENSMUST00000157559 107 ntBASIC1.81□□□□□ -2.12
Cx3cl1O35188 Gm24768-201ENSMUST00000158512 94 ntBASIC1.81□□□□□ -2.12
Cx3cl1O35188 Vmn2r-ps132-201ENSMUST00000176738 651 ntBASIC1.81□□□□□ -2.12
Cx3cl1O35188 Gm27761-201ENSMUST00000184091 131 ntBASIC1.81□□□□□ -2.12
Cx3cl1O35188 Gm27979-201ENSMUST00000185126 56 ntBASIC1.81□□□□□ -2.12
Cx3cl1O35188 Gm28283-201ENSMUST00000185509 178 ntBASIC1.81□□□□□ -2.12
Cx3cl1O35188 Gm3724-201ENSMUST00000197957 349 ntBASIC1.81□□□□□ -2.12
Cx3cl1O35188 Igkv1-108-201ENSMUST00000198926 298 ntBASIC1.81□□□□□ -2.12
Cx3cl1O35188 Gm39154-201ENSMUST00000210257 560 ntTSL 5 BASIC1.81□□□□□ -2.12
Cx3cl1O35188 AC144671.1-201ENSMUST00000215265 99 ntBASIC1.81□□□□□ -2.12
Cx3cl1O35188 Gm22974-201ENSMUST00000083301 103 ntBASIC1.81□□□□□ -2.12
Cx3cl1O35188 Gm22578-201ENSMUST00000083730 107 ntBASIC1.81□□□□□ -2.12
Cx3cl1O35188 Gm5670-201ENSMUST00000093546 372 ntBASIC1.81□□□□□ -2.12
Cx3cl1O35188 Zfp640-202ENSMUST00000224116 1562 ntBASIC1.81□□□□□ -2.12
Cx3cl1O35188 Olfr385-202ENSMUST00000215689 1671 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
Retrieved 100 of 76,532 protein–RNA pairs in 82.6 ms