Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC15.53■□□□□ 0.08
H2afb1S4R1E0 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC15.53■□□□□ 0.08
H2afb1S4R1E0 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
H2afb1S4R1E0 Gm4968-201ENSMUST00000071458 858 ntBASIC15.53■□□□□ 0.08
H2afb1S4R1E0 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
H2afb1S4R1E0 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
H2afb1S4R1E0 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
H2afb1S4R1E0 Gm37820-201ENSMUST00000194021 2147 ntBASIC15.53■□□□□ 0.08
H2afb1S4R1E0 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
H2afb1S4R1E0 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
H2afb1S4R1E0 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
H2afb1S4R1E0 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
H2afb1S4R1E0 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
H2afb1S4R1E0 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
H2afb1S4R1E0 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
H2afb1S4R1E0 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
H2afb1S4R1E0 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
H2afb1S4R1E0 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
H2afb1S4R1E0 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
H2afb1S4R1E0 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC15.52■□□□□ 0.08
H2afb1S4R1E0 Mir6349-201ENSMUST00000184059 97 ntBASIC15.52■□□□□ 0.08
H2afb1S4R1E0 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
H2afb1S4R1E0 Gm43272-201ENSMUST00000200599 1584 ntBASIC15.52■□□□□ 0.07
H2afb1S4R1E0 Gm20628-201ENSMUST00000177363 3215 ntBASIC15.52■□□□□ 0.07
H2afb1S4R1E0 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
H2afb1S4R1E0 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
H2afb1S4R1E0 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
H2afb1S4R1E0 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
H2afb1S4R1E0 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
H2afb1S4R1E0 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC15.51■□□□□ 0.07
H2afb1S4R1E0 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
H2afb1S4R1E0 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
H2afb1S4R1E0 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
H2afb1S4R1E0 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
H2afb1S4R1E0 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
H2afb1S4R1E0 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
H2afb1S4R1E0 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
H2afb1S4R1E0 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
H2afb1S4R1E0 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
H2afb1S4R1E0 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
H2afb1S4R1E0 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
H2afb1S4R1E0 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC15.51■□□□□ 0.07
H2afb1S4R1E0 Gm37179-201ENSMUST00000194862 823 ntBASIC15.51■□□□□ 0.07
H2afb1S4R1E0 Gm10138-203ENSMUST00000206952 366 ntBASIC15.51■□□□□ 0.07
H2afb1S4R1E0 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
H2afb1S4R1E0 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
H2afb1S4R1E0 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
H2afb1S4R1E0 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
H2afb1S4R1E0 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
H2afb1S4R1E0 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
H2afb1S4R1E0 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
H2afb1S4R1E0 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
H2afb1S4R1E0 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
H2afb1S4R1E0 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
H2afb1S4R1E0 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
H2afb1S4R1E0 Gm37166-201ENSMUST00000195473 2474 ntBASIC15.51■□□□□ 0.07
H2afb1S4R1E0 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC15.51■□□□□ 0.07
H2afb1S4R1E0 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
H2afb1S4R1E0 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
H2afb1S4R1E0 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
H2afb1S4R1E0 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
H2afb1S4R1E0 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
H2afb1S4R1E0 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
H2afb1S4R1E0 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
H2afb1S4R1E0 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC15.5■□□□□ 0.07
H2afb1S4R1E0 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
H2afb1S4R1E0 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
H2afb1S4R1E0 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC15.5■□□□□ 0.07
H2afb1S4R1E0 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
H2afb1S4R1E0 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
H2afb1S4R1E0 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
H2afb1S4R1E0 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
H2afb1S4R1E0 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
H2afb1S4R1E0 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
H2afb1S4R1E0 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
H2afb1S4R1E0 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
H2afb1S4R1E0 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
H2afb1S4R1E0 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
H2afb1S4R1E0 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
H2afb1S4R1E0 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
H2afb1S4R1E0 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
H2afb1S4R1E0 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
H2afb1S4R1E0 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
H2afb1S4R1E0 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
H2afb1S4R1E0 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
H2afb1S4R1E0 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
H2afb1S4R1E0 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC15.49■□□□□ 0.07
H2afb1S4R1E0 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC15.49■□□□□ 0.07
H2afb1S4R1E0 Gm11643-201ENSMUST00000119578 864 ntBASIC15.49■□□□□ 0.07
H2afb1S4R1E0 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
H2afb1S4R1E0 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC15.49■□□□□ 0.07
H2afb1S4R1E0 Mtag2-201ENSMUST00000058665 714 ntBASIC15.49■□□□□ 0.07
H2afb1S4R1E0 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
H2afb1S4R1E0 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
H2afb1S4R1E0 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
H2afb1S4R1E0 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
H2afb1S4R1E0 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC15.49■□□□□ 0.07
H2afb1S4R1E0 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
H2afb1S4R1E0 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC15.48■□□□□ 0.07
H2afb1S4R1E0 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms