Protein–RNA interactions for Protein: Q9R053

Scn11a, Sodium channel protein type 11 subunit alpha, mousemouse

Predictions only

Length 1,765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn11aQ9R053 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Scn11aQ9R053 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Scn11aQ9R053 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Scn11aQ9R053 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Scn11aQ9R053 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Scn11aQ9R053 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Scn11aQ9R053 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Scn11aQ9R053 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Scn11aQ9R053 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Scn11aQ9R053 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Scn11aQ9R053 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Scn11aQ9R053 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Scn11aQ9R053 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Scn11aQ9R053 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Scn11aQ9R053 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Scn11aQ9R053 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Scn11aQ9R053 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Scn11aQ9R053 Gm18733-201ENSMUST00000173950 856 ntBASIC20.27■□□□□ 0.84
Scn11aQ9R053 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Scn11aQ9R053 Gm45328-201ENSMUST00000210942 917 ntBASIC20.27■□□□□ 0.84
Scn11aQ9R053 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Scn11aQ9R053 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC20.27■□□□□ 0.84
Scn11aQ9R053 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Scn11aQ9R053 Gm37519-201ENSMUST00000191687 2210 ntBASIC20.27■□□□□ 0.84
Scn11aQ9R053 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Scn11aQ9R053 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Scn11aQ9R053 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Scn11aQ9R053 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC20.27■□□□□ 0.83
Scn11aQ9R053 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Scn11aQ9R053 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Scn11aQ9R053 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Scn11aQ9R053 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Scn11aQ9R053 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Scn11aQ9R053 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Scn11aQ9R053 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC20.26■□□□□ 0.83
Scn11aQ9R053 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Scn11aQ9R053 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Scn11aQ9R053 Gm43808-201ENSMUST00000202534 2065 ntBASIC20.26■□□□□ 0.83
Scn11aQ9R053 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
Scn11aQ9R053 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.26■□□□□ 0.83
Scn11aQ9R053 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Scn11aQ9R053 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
Scn11aQ9R053 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Scn11aQ9R053 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Scn11aQ9R053 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Scn11aQ9R053 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Scn11aQ9R053 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Scn11aQ9R053 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Scn11aQ9R053 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
Scn11aQ9R053 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Scn11aQ9R053 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Scn11aQ9R053 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Scn11aQ9R053 Zfp264-201ENSMUST00000208656 1563 ntBASIC20.25■□□□□ 0.83
Scn11aQ9R053 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC20.25■□□□□ 0.83
Scn11aQ9R053 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Scn11aQ9R053 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Scn11aQ9R053 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Scn11aQ9R053 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC20.24■□□□□ 0.83
Scn11aQ9R053 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Scn11aQ9R053 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Scn11aQ9R053 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Scn11aQ9R053 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC20.24■□□□□ 0.83
Scn11aQ9R053 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Scn11aQ9R053 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Scn11aQ9R053 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC20.24■□□□□ 0.83
Scn11aQ9R053 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Scn11aQ9R053 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Scn11aQ9R053 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Scn11aQ9R053 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Scn11aQ9R053 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Scn11aQ9R053 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Scn11aQ9R053 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Scn11aQ9R053 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Scn11aQ9R053 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Scn11aQ9R053 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Scn11aQ9R053 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Scn11aQ9R053 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
Scn11aQ9R053 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Scn11aQ9R053 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Scn11aQ9R053 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Scn11aQ9R053 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC20.23■□□□□ 0.83
Scn11aQ9R053 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Scn11aQ9R053 Gm27459-201ENSMUST00000184860 107 ntBASIC20.23■□□□□ 0.83
Scn11aQ9R053 Ighv6-1-201ENSMUST00000193612 343 ntBASIC20.23■□□□□ 0.83
Scn11aQ9R053 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC20.23■□□□□ 0.83
Scn11aQ9R053 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
Scn11aQ9R053 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
Scn11aQ9R053 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Scn11aQ9R053 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Scn11aQ9R053 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Scn11aQ9R053 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Scn11aQ9R053 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Scn11aQ9R053 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Scn11aQ9R053 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Scn11aQ9R053 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Scn11aQ9R053 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Scn11aQ9R053 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
Scn11aQ9R053 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Scn11aQ9R053 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Scn11aQ9R053 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms