Protein–RNA interactions for Protein: Q9QWF0

Chaf1a, Chromatin assembly factor 1 subunit A, mousemouse

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1aQ9QWF0 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Chaf1aQ9QWF0 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Chaf1aQ9QWF0 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Chaf1aQ9QWF0 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Chaf1aQ9QWF0 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chaf1aQ9QWF0 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chaf1aQ9QWF0 Gm37812-201ENSMUST00000195216 2475 ntBASIC19.15■□□□□ 0.66
Chaf1aQ9QWF0 Gm42918-201ENSMUST00000199249 1580 ntBASIC19.15■□□□□ 0.66
Chaf1aQ9QWF0 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chaf1aQ9QWF0 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chaf1aQ9QWF0 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chaf1aQ9QWF0 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chaf1aQ9QWF0 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Chaf1aQ9QWF0 Gm16499-203ENSMUST00000204633 2177 ntBASIC19.15■□□□□ 0.66
Chaf1aQ9QWF0 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chaf1aQ9QWF0 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Chaf1aQ9QWF0 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chaf1aQ9QWF0 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC19.15■□□□□ 0.66
Chaf1aQ9QWF0 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Chaf1aQ9QWF0 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chaf1aQ9QWF0 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Chaf1aQ9QWF0 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chaf1aQ9QWF0 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chaf1aQ9QWF0 Gm15743-202ENSMUST00000182690 1901 ntBASIC19.15■□□□□ 0.66
Chaf1aQ9QWF0 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chaf1aQ9QWF0 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chaf1aQ9QWF0 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chaf1aQ9QWF0 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Chaf1aQ9QWF0 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Chaf1aQ9QWF0 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
Chaf1aQ9QWF0 Gm10602-201ENSMUST00000098239 609 ntBASIC19.14■□□□□ 0.65
Chaf1aQ9QWF0 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Chaf1aQ9QWF0 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Chaf1aQ9QWF0 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Chaf1aQ9QWF0 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Chaf1aQ9QWF0 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Chaf1aQ9QWF0 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Chaf1aQ9QWF0 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Chaf1aQ9QWF0 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Chaf1aQ9QWF0 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Chaf1aQ9QWF0 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Chaf1aQ9QWF0 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Chaf1aQ9QWF0 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Chaf1aQ9QWF0 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Chaf1aQ9QWF0 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Chaf1aQ9QWF0 Gm10418-201ENSMUST00000100943 576 ntBASIC19.13■□□□□ 0.65
Chaf1aQ9QWF0 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Chaf1aQ9QWF0 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Chaf1aQ9QWF0 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC19.13■□□□□ 0.65
Chaf1aQ9QWF0 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Chaf1aQ9QWF0 Gm3807-201ENSMUST00000193520 1168 ntBASIC19.13■□□□□ 0.65
Chaf1aQ9QWF0 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Chaf1aQ9QWF0 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Chaf1aQ9QWF0 Dio3-201ENSMUST00000097228 1449 ntBASIC19.13■□□□□ 0.65
Chaf1aQ9QWF0 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC19.13■□□□□ 0.65
Chaf1aQ9QWF0 Gm43272-201ENSMUST00000200599 1584 ntBASIC19.13■□□□□ 0.65
Chaf1aQ9QWF0 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Chaf1aQ9QWF0 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Chaf1aQ9QWF0 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Chaf1aQ9QWF0 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
Chaf1aQ9QWF0 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Chaf1aQ9QWF0 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Chaf1aQ9QWF0 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Chaf1aQ9QWF0 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Chaf1aQ9QWF0 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Chaf1aQ9QWF0 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chaf1aQ9QWF0 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chaf1aQ9QWF0 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chaf1aQ9QWF0 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chaf1aQ9QWF0 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chaf1aQ9QWF0 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chaf1aQ9QWF0 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chaf1aQ9QWF0 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chaf1aQ9QWF0 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Chaf1aQ9QWF0 Gm11249-201ENSMUST00000117071 859 ntBASIC19.12■□□□□ 0.65
Chaf1aQ9QWF0 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Chaf1aQ9QWF0 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chaf1aQ9QWF0 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chaf1aQ9QWF0 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chaf1aQ9QWF0 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Chaf1aQ9QWF0 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC19.11■□□□□ 0.65
Chaf1aQ9QWF0 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Chaf1aQ9QWF0 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Chaf1aQ9QWF0 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Chaf1aQ9QWF0 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Chaf1aQ9QWF0 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
Chaf1aQ9QWF0 Gm45560-201ENSMUST00000211492 1472 ntBASIC19.11■□□□□ 0.65
Chaf1aQ9QWF0 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Chaf1aQ9QWF0 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Chaf1aQ9QWF0 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Chaf1aQ9QWF0 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Chaf1aQ9QWF0 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
Chaf1aQ9QWF0 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC19.11■□□□□ 0.65
Chaf1aQ9QWF0 Gm27275-201ENSMUST00000184318 272 ntBASIC19.11■□□□□ 0.65
Chaf1aQ9QWF0 Alkbh1-212ENSMUST00000185301 408 ntBASIC19.11■□□□□ 0.65
Chaf1aQ9QWF0 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
Chaf1aQ9QWF0 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
Chaf1aQ9QWF0 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Chaf1aQ9QWF0 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Chaf1aQ9QWF0 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms