Protein–RNA interactions for Protein: Q9QUM7

Msh5, MutS protein homolog 5, mousemouse

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh5Q9QUM7 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Msh5Q9QUM7 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Msh5Q9QUM7 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Msh5Q9QUM7 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Msh5Q9QUM7 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Msh5Q9QUM7 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Msh5Q9QUM7 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.46■□□□□ 0.39
Msh5Q9QUM7 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Msh5Q9QUM7 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Msh5Q9QUM7 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Msh5Q9QUM7 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Msh5Q9QUM7 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Msh5Q9QUM7 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Msh5Q9QUM7 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Msh5Q9QUM7 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
Msh5Q9QUM7 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Msh5Q9QUM7 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Msh5Q9QUM7 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Msh5Q9QUM7 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Msh5Q9QUM7 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC17.45■□□□□ 0.38
Msh5Q9QUM7 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Msh5Q9QUM7 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Msh5Q9QUM7 Gm13401-201ENSMUST00000117074 291 ntBASIC17.45■□□□□ 0.38
Msh5Q9QUM7 Gm14913-201ENSMUST00000120011 1093 ntBASIC17.45■□□□□ 0.38
Msh5Q9QUM7 Gm13299-201ENSMUST00000133644 425 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Msh5Q9QUM7 Gm13307-202ENSMUST00000142990 425 ntTSL 5 BASIC17.45■□□□□ 0.38
Msh5Q9QUM7 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Msh5Q9QUM7 AC154248.2-201ENSMUST00000221964 659 ntTSL 5 BASIC17.45■□□□□ 0.38
Msh5Q9QUM7 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Msh5Q9QUM7 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC17.45■□□□□ 0.38
Msh5Q9QUM7 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Msh5Q9QUM7 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Msh5Q9QUM7 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Msh5Q9QUM7 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Msh5Q9QUM7 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Msh5Q9QUM7 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Msh5Q9QUM7 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Msh5Q9QUM7 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Msh5Q9QUM7 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Msh5Q9QUM7 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Msh5Q9QUM7 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Msh5Q9QUM7 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Msh5Q9QUM7 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Msh5Q9QUM7 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Msh5Q9QUM7 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Msh5Q9QUM7 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Msh5Q9QUM7 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Msh5Q9QUM7 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Msh5Q9QUM7 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Msh5Q9QUM7 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Msh5Q9QUM7 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Msh5Q9QUM7 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Msh5Q9QUM7 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Msh5Q9QUM7 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Msh5Q9QUM7 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Msh5Q9QUM7 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Msh5Q9QUM7 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Msh5Q9QUM7 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC17.43■□□□□ 0.38
Msh5Q9QUM7 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Msh5Q9QUM7 Gm5643-201ENSMUST00000117081 966 ntBASIC17.43■□□□□ 0.38
Msh5Q9QUM7 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Msh5Q9QUM7 Gm15375-201ENSMUST00000119510 849 ntBASIC17.43■□□□□ 0.38
Msh5Q9QUM7 Gm29241-201ENSMUST00000189260 1096 ntBASIC17.43■□□□□ 0.38
Msh5Q9QUM7 Gm18666-201ENSMUST00000190039 958 ntBASIC17.43■□□□□ 0.38
Msh5Q9QUM7 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Msh5Q9QUM7 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Msh5Q9QUM7 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Msh5Q9QUM7 Nrn1-203ENSMUST00000223611 1443 ntBASIC17.43■□□□□ 0.38
Msh5Q9QUM7 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Msh5Q9QUM7 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
Msh5Q9QUM7 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Msh5Q9QUM7 Gm45560-201ENSMUST00000211492 1472 ntBASIC17.43■□□□□ 0.38
Msh5Q9QUM7 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Msh5Q9QUM7 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Msh5Q9QUM7 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Msh5Q9QUM7 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Msh5Q9QUM7 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Msh5Q9QUM7 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC17.42■□□□□ 0.38
Msh5Q9QUM7 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Msh5Q9QUM7 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Msh5Q9QUM7 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC17.42■□□□□ 0.38
Msh5Q9QUM7 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Msh5Q9QUM7 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Msh5Q9QUM7 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC17.42■□□□□ 0.38
Msh5Q9QUM7 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Msh5Q9QUM7 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Msh5Q9QUM7 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Msh5Q9QUM7 Gm5297-201ENSMUST00000198555 1171 ntBASIC17.42■□□□□ 0.38
Msh5Q9QUM7 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Msh5Q9QUM7 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Msh5Q9QUM7 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Msh5Q9QUM7 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Msh5Q9QUM7 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Msh5Q9QUM7 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC17.42■□□□□ 0.38
Msh5Q9QUM7 Cxcl14-202ENSMUST00000224801 1467 ntBASIC17.42■□□□□ 0.38
Msh5Q9QUM7 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Msh5Q9QUM7 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
Msh5Q9QUM7 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Msh5Q9QUM7 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Msh5Q9QUM7 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms