Protein–RNA interactions for Protein: Q9JM58

Crlf1, Cytokine receptor-like factor 1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crlf1Q9JM58 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Crlf1Q9JM58 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Crlf1Q9JM58 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Crlf1Q9JM58 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Crlf1Q9JM58 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC13.7□□□□□ -0.22
Crlf1Q9JM58 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC13.7□□□□□ -0.22
Crlf1Q9JM58 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Crlf1Q9JM58 CT943659.1-201ENSMUST00000215459 326 ntBASIC13.7□□□□□ -0.22
Crlf1Q9JM58 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Crlf1Q9JM58 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Crlf1Q9JM58 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Crlf1Q9JM58 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC13.7□□□□□ -0.22
Crlf1Q9JM58 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Crlf1Q9JM58 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Crlf1Q9JM58 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC13.7□□□□□ -0.22
Crlf1Q9JM58 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC13.69□□□□□ -0.22
Crlf1Q9JM58 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Crlf1Q9JM58 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Crlf1Q9JM58 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Crlf1Q9JM58 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Crlf1Q9JM58 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Crlf1Q9JM58 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Crlf1Q9JM58 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Crlf1Q9JM58 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Crlf1Q9JM58 Gm15467-201ENSMUST00000120582 445 ntBASIC13.69□□□□□ -0.22
Crlf1Q9JM58 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC13.69□□□□□ -0.22
Crlf1Q9JM58 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Crlf1Q9JM58 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Crlf1Q9JM58 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Crlf1Q9JM58 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Crlf1Q9JM58 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Crlf1Q9JM58 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Crlf1Q9JM58 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Crlf1Q9JM58 Zkscan4-202ENSMUST00000225845 1506 ntBASIC13.69□□□□□ -0.22
Crlf1Q9JM58 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Crlf1Q9JM58 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Crlf1Q9JM58 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Crlf1Q9JM58 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Crlf1Q9JM58 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Crlf1Q9JM58 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Crlf1Q9JM58 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Crlf1Q9JM58 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Crlf1Q9JM58 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Crlf1Q9JM58 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Crlf1Q9JM58 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Crlf1Q9JM58 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Crlf1Q9JM58 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC13.68□□□□□ -0.22
Crlf1Q9JM58 Rprl3-201ENSMUST00000157400 290 ntBASIC13.68□□□□□ -0.22
Crlf1Q9JM58 Gm10576-201ENSMUST00000191927 825 ntBASIC13.68□□□□□ -0.22
Crlf1Q9JM58 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Crlf1Q9JM58 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Crlf1Q9JM58 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Crlf1Q9JM58 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Crlf1Q9JM58 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Crlf1Q9JM58 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Crlf1Q9JM58 Gm18856-201ENSMUST00000178096 1374 ntBASIC13.68□□□□□ -0.22
Crlf1Q9JM58 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Crlf1Q9JM58 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Crlf1Q9JM58 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Crlf1Q9JM58 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC13.67□□□□□ -0.22
Crlf1Q9JM58 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Crlf1Q9JM58 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Crlf1Q9JM58 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Crlf1Q9JM58 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Crlf1Q9JM58 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Crlf1Q9JM58 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Crlf1Q9JM58 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Crlf1Q9JM58 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Crlf1Q9JM58 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Crlf1Q9JM58 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Crlf1Q9JM58 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Crlf1Q9JM58 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Crlf1Q9JM58 AC160338.1-201ENSMUST00000214232 705 ntBASIC13.67□□□□□ -0.22
Crlf1Q9JM58 Cmtm5-203ENSMUST00000227441 610 ntBASIC13.67□□□□□ -0.22
Crlf1Q9JM58 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Crlf1Q9JM58 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Crlf1Q9JM58 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Crlf1Q9JM58 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Crlf1Q9JM58 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Crlf1Q9JM58 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Crlf1Q9JM58 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Crlf1Q9JM58 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Crlf1Q9JM58 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Crlf1Q9JM58 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Crlf1Q9JM58 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Crlf1Q9JM58 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
Crlf1Q9JM58 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC13.66□□□□□ -0.22
Crlf1Q9JM58 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Crlf1Q9JM58 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Crlf1Q9JM58 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Crlf1Q9JM58 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC13.66□□□□□ -0.22
Crlf1Q9JM58 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC13.66□□□□□ -0.22
Crlf1Q9JM58 Gm13830-205ENSMUST00000201195 1155 ntBASIC13.66□□□□□ -0.22
Crlf1Q9JM58 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Crlf1Q9JM58 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Crlf1Q9JM58 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Crlf1Q9JM58 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Crlf1Q9JM58 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Crlf1Q9JM58 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Crlf1Q9JM58 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms