Protein–RNA interactions for Protein: Q9JIG4

Ppp1r3f, Protein phosphatase 1 regulatory subunit 3F, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ppp1r3fQ9JIG4 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Ppp1r3fQ9JIG4 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
Ppp1r3fQ9JIG4 Gm38027-201ENSMUST00000192315 235 ntBASIC21.73■■□□□ 1.07
Ppp1r3fQ9JIG4 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC21.73■■□□□ 1.07
Ppp1r3fQ9JIG4 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ppp1r3fQ9JIG4 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Ppp1r3fQ9JIG4 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ppp1r3fQ9JIG4 Mir5130-201ENSMUST00000175160 84 ntBASIC21.72■■□□□ 1.07
Ppp1r3fQ9JIG4 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC21.72■■□□□ 1.07
Ppp1r3fQ9JIG4 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ppp1r3fQ9JIG4 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ppp1r3fQ9JIG4 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ppp1r3fQ9JIG4 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
Ppp1r3fQ9JIG4 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ppp1r3fQ9JIG4 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Ppp1r3fQ9JIG4 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Ppp1r3fQ9JIG4 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ppp1r3fQ9JIG4 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ppp1r3fQ9JIG4 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC21.71■■□□□ 1.07
Ppp1r3fQ9JIG4 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC21.71■■□□□ 1.07
Ppp1r3fQ9JIG4 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ppp1r3fQ9JIG4 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ppp1r3fQ9JIG4 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ppp1r3fQ9JIG4 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ppp1r3fQ9JIG4 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ppp1r3fQ9JIG4 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Ppp1r3fQ9JIG4 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ppp1r3fQ9JIG4 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Ppp1r3fQ9JIG4 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Ppp1r3fQ9JIG4 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ppp1r3fQ9JIG4 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ppp1r3fQ9JIG4 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Ppp1r3fQ9JIG4 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ppp1r3fQ9JIG4 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC21.7■■□□□ 1.06
Ppp1r3fQ9JIG4 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC21.7■■□□□ 1.06
Ppp1r3fQ9JIG4 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC21.7■■□□□ 1.06
Ppp1r3fQ9JIG4 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Ppp1r3fQ9JIG4 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ppp1r3fQ9JIG4 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ppp1r3fQ9JIG4 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC21.7■■□□□ 1.06
Ppp1r3fQ9JIG4 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
Ppp1r3fQ9JIG4 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ppp1r3fQ9JIG4 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ppp1r3fQ9JIG4 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Ppp1r3fQ9JIG4 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ppp1r3fQ9JIG4 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Ppp1r3fQ9JIG4 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ppp1r3fQ9JIG4 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ppp1r3fQ9JIG4 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ppp1r3fQ9JIG4 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Ppp1r3fQ9JIG4 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ppp1r3fQ9JIG4 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ppp1r3fQ9JIG4 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Ppp1r3fQ9JIG4 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ppp1r3fQ9JIG4 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ppp1r3fQ9JIG4 Tfap2a-209ENSMUST00000225180 1828 ntBASIC21.69■■□□□ 1.06
Ppp1r3fQ9JIG4 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ppp1r3fQ9JIG4 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ppp1r3fQ9JIG4 Gm25016-201ENSMUST00000158399 131 ntBASIC21.68■■□□□ 1.06
Ppp1r3fQ9JIG4 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ppp1r3fQ9JIG4 Gm5867-201ENSMUST00000063197 592 ntBASIC21.68■■□□□ 1.06
Ppp1r3fQ9JIG4 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC21.68■■□□□ 1.06
Ppp1r3fQ9JIG4 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ppp1r3fQ9JIG4 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Ppp1r3fQ9JIG4 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Ppp1r3fQ9JIG4 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Ppp1r3fQ9JIG4 Gm7638-201ENSMUST00000121348 967 ntBASIC21.67■■□□□ 1.06
Ppp1r3fQ9JIG4 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ppp1r3fQ9JIG4 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC21.67■■□□□ 1.06
Ppp1r3fQ9JIG4 Gm22697-201ENSMUST00000175194 63 ntBASIC21.67■■□□□ 1.06
Ppp1r3fQ9JIG4 Gm28033-201ENSMUST00000184224 96 ntBASIC21.67■■□□□ 1.06
Ppp1r3fQ9JIG4 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ppp1r3fQ9JIG4 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Ppp1r3fQ9JIG4 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ppp1r3fQ9JIG4 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC21.67■■□□□ 1.06
Ppp1r3fQ9JIG4 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ppp1r3fQ9JIG4 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC21.67■■□□□ 1.06
Ppp1r3fQ9JIG4 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ppp1r3fQ9JIG4 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC21.66■■□□□ 1.06
Ppp1r3fQ9JIG4 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Ppp1r3fQ9JIG4 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Ppp1r3fQ9JIG4 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC21.66■■□□□ 1.06
Ppp1r3fQ9JIG4 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ppp1r3fQ9JIG4 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ppp1r3fQ9JIG4 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
Ppp1r3fQ9JIG4 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ppp1r3fQ9JIG4 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC21.66■■□□□ 1.06
Ppp1r3fQ9JIG4 Gm27463-201ENSMUST00000183569 57 ntBASIC21.66■■□□□ 1.06
Ppp1r3fQ9JIG4 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ppp1r3fQ9JIG4 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC21.66■■□□□ 1.06
Ppp1r3fQ9JIG4 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ppp1r3fQ9JIG4 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ppp1r3fQ9JIG4 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ppp1r3fQ9JIG4 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ppp1r3fQ9JIG4 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ppp1r3fQ9JIG4 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Ppp1r3fQ9JIG4 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ppp1r3fQ9JIG4 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ppp1r3fQ9JIG4 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Ppp1r3fQ9JIG4 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms