Protein–RNA interactions for Protein: Q9ES97

Rtn3, Reticulon-3, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn3Q9ES97 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rtn3Q9ES97 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC18.23■□□□□ 0.51
Rtn3Q9ES97 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Rtn3Q9ES97 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC18.23■□□□□ 0.51
Rtn3Q9ES97 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC18.23■□□□□ 0.51
Rtn3Q9ES97 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rtn3Q9ES97 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Rtn3Q9ES97 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Rtn3Q9ES97 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rtn3Q9ES97 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rtn3Q9ES97 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Rtn3Q9ES97 Gm43272-201ENSMUST00000200599 1584 ntBASIC18.22■□□□□ 0.51
Rtn3Q9ES97 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rtn3Q9ES97 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rtn3Q9ES97 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC18.22■□□□□ 0.51
Rtn3Q9ES97 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rtn3Q9ES97 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rtn3Q9ES97 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC18.22■□□□□ 0.51
Rtn3Q9ES97 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC18.22■□□□□ 0.51
Rtn3Q9ES97 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rtn3Q9ES97 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Rtn3Q9ES97 AC175538.1-201ENSMUST00000225343 1269 ntBASIC18.22■□□□□ 0.51
Rtn3Q9ES97 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rtn3Q9ES97 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rtn3Q9ES97 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rtn3Q9ES97 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Rtn3Q9ES97 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rtn3Q9ES97 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rtn3Q9ES97 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rtn3Q9ES97 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Rtn3Q9ES97 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rtn3Q9ES97 Gm12382-201ENSMUST00000122005 922 ntBASIC18.21■□□□□ 0.51
Rtn3Q9ES97 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rtn3Q9ES97 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Rtn3Q9ES97 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC18.21■□□□□ 0.51
Rtn3Q9ES97 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
Rtn3Q9ES97 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Rtn3Q9ES97 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
Rtn3Q9ES97 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rtn3Q9ES97 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Rtn3Q9ES97 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rtn3Q9ES97 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Rtn3Q9ES97 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rtn3Q9ES97 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
Rtn3Q9ES97 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rtn3Q9ES97 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Rtn3Q9ES97 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Rtn3Q9ES97 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Rtn3Q9ES97 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC18.2■□□□□ 0.5
Rtn3Q9ES97 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC18.2■□□□□ 0.5
Rtn3Q9ES97 Mir5122-201ENSMUST00000175004 89 ntBASIC18.2■□□□□ 0.5
Rtn3Q9ES97 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rtn3Q9ES97 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Rtn3Q9ES97 AC166341.7-201ENSMUST00000221698 126 ntBASIC18.2■□□□□ 0.5
Rtn3Q9ES97 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rtn3Q9ES97 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rtn3Q9ES97 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rtn3Q9ES97 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rtn3Q9ES97 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rtn3Q9ES97 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rtn3Q9ES97 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rtn3Q9ES97 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rtn3Q9ES97 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Rtn3Q9ES97 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC18.2■□□□□ 0.5
Rtn3Q9ES97 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Rtn3Q9ES97 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Rtn3Q9ES97 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rtn3Q9ES97 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rtn3Q9ES97 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rtn3Q9ES97 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rtn3Q9ES97 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rtn3Q9ES97 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Rtn3Q9ES97 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Rtn3Q9ES97 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rtn3Q9ES97 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Rtn3Q9ES97 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Rtn3Q9ES97 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Rtn3Q9ES97 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC18.19■□□□□ 0.5
Rtn3Q9ES97 Gm37292-201ENSMUST00000192062 758 ntBASIC18.19■□□□□ 0.5
Rtn3Q9ES97 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rtn3Q9ES97 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rtn3Q9ES97 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rtn3Q9ES97 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rtn3Q9ES97 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Rtn3Q9ES97 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rtn3Q9ES97 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Rtn3Q9ES97 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rtn3Q9ES97 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rtn3Q9ES97 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rtn3Q9ES97 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
Rtn3Q9ES97 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
Rtn3Q9ES97 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rtn3Q9ES97 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Rtn3Q9ES97 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Rtn3Q9ES97 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC18.18■□□□□ 0.5
Rtn3Q9ES97 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rtn3Q9ES97 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rtn3Q9ES97 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Rtn3Q9ES97 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Rtn3Q9ES97 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms