Protein–RNA interactions for Protein: Q9EPU4

Cpsf1, Cleavage and polyadenylation specificity factor subunit 1, mousemouse

Known RBP Predictions only

Length 1,441 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1Q9EPU4 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC23.64■■□□□ 1.37
Cpsf1Q9EPU4 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Cpsf1Q9EPU4 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Cpsf1Q9EPU4 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Cpsf1Q9EPU4 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Cpsf1Q9EPU4 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Cpsf1Q9EPU4 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.37
Cpsf1Q9EPU4 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.37
Cpsf1Q9EPU4 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Cpsf1Q9EPU4 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Cpsf1Q9EPU4 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Cpsf1Q9EPU4 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Cpsf1Q9EPU4 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Cpsf1Q9EPU4 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Cpsf1Q9EPU4 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Cpsf1Q9EPU4 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC23.63■■□□□ 1.37
Cpsf1Q9EPU4 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC23.63■■□□□ 1.37
Cpsf1Q9EPU4 Gm11336-201ENSMUST00000118168 334 ntBASIC23.63■■□□□ 1.37
Cpsf1Q9EPU4 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC23.63■■□□□ 1.37
Cpsf1Q9EPU4 AC122351.1-201ENSMUST00000220467 126 ntBASIC23.63■■□□□ 1.37
Cpsf1Q9EPU4 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Cpsf1Q9EPU4 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Cpsf1Q9EPU4 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Cpsf1Q9EPU4 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC23.63■■□□□ 1.37
Cpsf1Q9EPU4 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Cpsf1Q9EPU4 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
Cpsf1Q9EPU4 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC23.63■■□□□ 1.37
Cpsf1Q9EPU4 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Cpsf1Q9EPU4 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Cpsf1Q9EPU4 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC23.62■■□□□ 1.37
Cpsf1Q9EPU4 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Cpsf1Q9EPU4 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
Cpsf1Q9EPU4 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC23.62■■□□□ 1.37
Cpsf1Q9EPU4 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC23.62■■□□□ 1.37
Cpsf1Q9EPU4 AC159205.3-201ENSMUST00000224614 874 ntBASIC23.62■■□□□ 1.37
Cpsf1Q9EPU4 AC107711.5-202ENSMUST00000226429 702 ntBASIC23.62■■□□□ 1.37
Cpsf1Q9EPU4 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Cpsf1Q9EPU4 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC23.62■■□□□ 1.37
Cpsf1Q9EPU4 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC23.62■■□□□ 1.37
Cpsf1Q9EPU4 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
Cpsf1Q9EPU4 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC23.62■■□□□ 1.37
Cpsf1Q9EPU4 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Cpsf1Q9EPU4 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Cpsf1Q9EPU4 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC23.61■■□□□ 1.37
Cpsf1Q9EPU4 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Cpsf1Q9EPU4 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Cpsf1Q9EPU4 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Cpsf1Q9EPU4 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC23.61■■□□□ 1.37
Cpsf1Q9EPU4 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Cpsf1Q9EPU4 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
Cpsf1Q9EPU4 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC23.61■■□□□ 1.37
Cpsf1Q9EPU4 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC23.61■■□□□ 1.37
Cpsf1Q9EPU4 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
Cpsf1Q9EPU4 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Cpsf1Q9EPU4 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Cpsf1Q9EPU4 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Cpsf1Q9EPU4 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Cpsf1Q9EPU4 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC23.61■■□□□ 1.37
Cpsf1Q9EPU4 Gm43702-201ENSMUST00000198772 2546 ntBASIC23.61■■□□□ 1.37
Cpsf1Q9EPU4 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Cpsf1Q9EPU4 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Cpsf1Q9EPU4 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC23.6■■□□□ 1.37
Cpsf1Q9EPU4 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC23.6■■□□□ 1.37
Cpsf1Q9EPU4 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC23.6■■□□□ 1.37
Cpsf1Q9EPU4 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC23.6■■□□□ 1.37
Cpsf1Q9EPU4 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC23.6■■□□□ 1.37
Cpsf1Q9EPU4 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
Cpsf1Q9EPU4 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Cpsf1Q9EPU4 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
Cpsf1Q9EPU4 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC23.6■■□□□ 1.37
Cpsf1Q9EPU4 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Cpsf1Q9EPU4 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Cpsf1Q9EPU4 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC23.59■■□□□ 1.37
Cpsf1Q9EPU4 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Cpsf1Q9EPU4 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Cpsf1Q9EPU4 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC23.59■■□□□ 1.37
Cpsf1Q9EPU4 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
Cpsf1Q9EPU4 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Cpsf1Q9EPU4 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC23.59■■□□□ 1.37
Cpsf1Q9EPU4 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Cpsf1Q9EPU4 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Cpsf1Q9EPU4 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Cpsf1Q9EPU4 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Cpsf1Q9EPU4 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC23.59■■□□□ 1.37
Cpsf1Q9EPU4 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Cpsf1Q9EPU4 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC23.59■■□□□ 1.37
Cpsf1Q9EPU4 Gm18421-201ENSMUST00000204122 625 ntBASIC23.59■■□□□ 1.37
Cpsf1Q9EPU4 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Cpsf1Q9EPU4 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
Cpsf1Q9EPU4 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Cpsf1Q9EPU4 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC23.58■■□□□ 1.37
Cpsf1Q9EPU4 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC23.58■■□□□ 1.36
Cpsf1Q9EPU4 Gm14464-201ENSMUST00000119658 1254 ntBASIC23.58■■□□□ 1.36
Cpsf1Q9EPU4 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC23.58■■□□□ 1.36
Cpsf1Q9EPU4 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
Cpsf1Q9EPU4 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC23.58■■□□□ 1.36
Cpsf1Q9EPU4 Gm18669-201ENSMUST00000216049 778 ntBASIC23.58■■□□□ 1.36
Cpsf1Q9EPU4 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC23.58■■□□□ 1.36
Cpsf1Q9EPU4 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
Cpsf1Q9EPU4 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms