Protein–RNA interactions for Protein: Q9D9Y8

Ssmem1, RIKEN cDNA 1700025E21, isoform CRA_b, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssmem1Q9D9Y8 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Ssmem1Q9D9Y8 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Ssmem1Q9D9Y8 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC14.78□□□□□ -0.04
Ssmem1Q9D9Y8 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ssmem1Q9D9Y8 Gm16061-201ENSMUST00000122167 857 ntBASIC14.78□□□□□ -0.04
Ssmem1Q9D9Y8 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC14.78□□□□□ -0.04
Ssmem1Q9D9Y8 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC14.78□□□□□ -0.04
Ssmem1Q9D9Y8 Gm29994-201ENSMUST00000195495 1193 ntBASIC14.78□□□□□ -0.04
Ssmem1Q9D9Y8 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC14.78□□□□□ -0.04
Ssmem1Q9D9Y8 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ssmem1Q9D9Y8 Gm42900-201ENSMUST00000197184 2167 ntBASIC14.78□□□□□ -0.04
Ssmem1Q9D9Y8 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ssmem1Q9D9Y8 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ssmem1Q9D9Y8 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ssmem1Q9D9Y8 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ssmem1Q9D9Y8 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ssmem1Q9D9Y8 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Ssmem1Q9D9Y8 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ssmem1Q9D9Y8 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ssmem1Q9D9Y8 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Ssmem1Q9D9Y8 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC14.77□□□□□ -0.04
Ssmem1Q9D9Y8 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Ssmem1Q9D9Y8 Gm13474-201ENSMUST00000122466 815 ntBASIC14.77□□□□□ -0.05
Ssmem1Q9D9Y8 Gm45058-201ENSMUST00000205810 766 ntBASIC14.77□□□□□ -0.05
Ssmem1Q9D9Y8 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Ssmem1Q9D9Y8 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
Ssmem1Q9D9Y8 AC121577.1-201ENSMUST00000227302 707 ntBASIC14.77□□□□□ -0.05
Ssmem1Q9D9Y8 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ssmem1Q9D9Y8 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Ssmem1Q9D9Y8 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC14.77□□□□□ -0.05
Ssmem1Q9D9Y8 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ssmem1Q9D9Y8 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Ssmem1Q9D9Y8 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ssmem1Q9D9Y8 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.05
Ssmem1Q9D9Y8 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ssmem1Q9D9Y8 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Ssmem1Q9D9Y8 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Ssmem1Q9D9Y8 Zcchc6-207ENSMUST00000225576 2499 ntBASIC14.76□□□□□ -0.05
Ssmem1Q9D9Y8 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Ssmem1Q9D9Y8 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ssmem1Q9D9Y8 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Ssmem1Q9D9Y8 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ssmem1Q9D9Y8 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ssmem1Q9D9Y8 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
Ssmem1Q9D9Y8 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC14.76□□□□□ -0.05
Ssmem1Q9D9Y8 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Ssmem1Q9D9Y8 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ssmem1Q9D9Y8 Mir5130-201ENSMUST00000175160 84 ntBASIC14.76□□□□□ -0.05
Ssmem1Q9D9Y8 Gm4217-201ENSMUST00000182243 1002 ntBASIC14.76□□□□□ -0.05
Ssmem1Q9D9Y8 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC14.76□□□□□ -0.05
Ssmem1Q9D9Y8 Gm43702-201ENSMUST00000198772 2546 ntBASIC14.76□□□□□ -0.05
Ssmem1Q9D9Y8 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Ssmem1Q9D9Y8 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC14.76□□□□□ -0.05
Ssmem1Q9D9Y8 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC14.76□□□□□ -0.05
Ssmem1Q9D9Y8 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ssmem1Q9D9Y8 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ssmem1Q9D9Y8 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ssmem1Q9D9Y8 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Ssmem1Q9D9Y8 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ssmem1Q9D9Y8 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC14.75□□□□□ -0.05
Ssmem1Q9D9Y8 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Ssmem1Q9D9Y8 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ssmem1Q9D9Y8 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ssmem1Q9D9Y8 Gm10231-201ENSMUST00000181584 441 ntBASIC14.75□□□□□ -0.05
Ssmem1Q9D9Y8 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ssmem1Q9D9Y8 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC14.75□□□□□ -0.05
Ssmem1Q9D9Y8 Gm10175-202ENSMUST00000208752 441 ntBASIC14.75□□□□□ -0.05
Ssmem1Q9D9Y8 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ssmem1Q9D9Y8 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ssmem1Q9D9Y8 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ssmem1Q9D9Y8 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Ssmem1Q9D9Y8 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ssmem1Q9D9Y8 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ssmem1Q9D9Y8 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Ssmem1Q9D9Y8 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ssmem1Q9D9Y8 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Ssmem1Q9D9Y8 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ssmem1Q9D9Y8 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC14.75□□□□□ -0.05
Ssmem1Q9D9Y8 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ssmem1Q9D9Y8 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Ssmem1Q9D9Y8 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Ssmem1Q9D9Y8 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ssmem1Q9D9Y8 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC14.74□□□□□ -0.05
Ssmem1Q9D9Y8 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ssmem1Q9D9Y8 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ssmem1Q9D9Y8 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ssmem1Q9D9Y8 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Ssmem1Q9D9Y8 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Ssmem1Q9D9Y8 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ssmem1Q9D9Y8 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Ssmem1Q9D9Y8 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ssmem1Q9D9Y8 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ssmem1Q9D9Y8 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ssmem1Q9D9Y8 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ssmem1Q9D9Y8 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ssmem1Q9D9Y8 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ssmem1Q9D9Y8 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ssmem1Q9D9Y8 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ssmem1Q9D9Y8 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ssmem1Q9D9Y8 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 11.6 ms