Protein–RNA interactions for Protein: Q9CWX9

Ddx47, Probable ATP-dependent RNA helicase DDX47, mousemouse

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx47Q9CWX9 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ddx47Q9CWX9 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Ddx47Q9CWX9 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC17.64■□□□□ 0.41
Ddx47Q9CWX9 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Ddx47Q9CWX9 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ddx47Q9CWX9 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ddx47Q9CWX9 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ddx47Q9CWX9 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ddx47Q9CWX9 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ddx47Q9CWX9 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ddx47Q9CWX9 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ddx47Q9CWX9 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ddx47Q9CWX9 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ddx47Q9CWX9 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ddx47Q9CWX9 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ddx47Q9CWX9 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ddx47Q9CWX9 Gm13401-201ENSMUST00000117074 291 ntBASIC17.63■□□□□ 0.41
Ddx47Q9CWX9 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ddx47Q9CWX9 AC140264.2-202ENSMUST00000218746 817 ntBASIC17.63■□□□□ 0.41
Ddx47Q9CWX9 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC17.63■□□□□ 0.41
Ddx47Q9CWX9 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ddx47Q9CWX9 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ddx47Q9CWX9 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ddx47Q9CWX9 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
Ddx47Q9CWX9 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ddx47Q9CWX9 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ddx47Q9CWX9 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ddx47Q9CWX9 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Ddx47Q9CWX9 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ddx47Q9CWX9 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ddx47Q9CWX9 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Ddx47Q9CWX9 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ddx47Q9CWX9 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ddx47Q9CWX9 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Ddx47Q9CWX9 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC17.62■□□□□ 0.41
Ddx47Q9CWX9 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ddx47Q9CWX9 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ddx47Q9CWX9 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC17.62■□□□□ 0.41
Ddx47Q9CWX9 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ddx47Q9CWX9 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC17.62■□□□□ 0.41
Ddx47Q9CWX9 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ddx47Q9CWX9 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ddx47Q9CWX9 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Ddx47Q9CWX9 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ddx47Q9CWX9 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ddx47Q9CWX9 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ddx47Q9CWX9 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ddx47Q9CWX9 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ddx47Q9CWX9 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ddx47Q9CWX9 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ddx47Q9CWX9 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ddx47Q9CWX9 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC17.61■□□□□ 0.41
Ddx47Q9CWX9 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ddx47Q9CWX9 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ddx47Q9CWX9 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Ddx47Q9CWX9 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ddx47Q9CWX9 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ddx47Q9CWX9 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ddx47Q9CWX9 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ddx47Q9CWX9 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ddx47Q9CWX9 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ddx47Q9CWX9 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ddx47Q9CWX9 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
Ddx47Q9CWX9 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ddx47Q9CWX9 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ddx47Q9CWX9 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
Ddx47Q9CWX9 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Ddx47Q9CWX9 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
Ddx47Q9CWX9 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ddx47Q9CWX9 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ddx47Q9CWX9 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ddx47Q9CWX9 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ddx47Q9CWX9 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
Ddx47Q9CWX9 Gm21168-201ENSMUST00000199646 1096 ntBASIC17.6■□□□□ 0.41
Ddx47Q9CWX9 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ddx47Q9CWX9 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ddx47Q9CWX9 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ddx47Q9CWX9 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Ddx47Q9CWX9 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ddx47Q9CWX9 Gm19721-201ENSMUST00000195284 1764 ntBASIC17.6■□□□□ 0.41
Ddx47Q9CWX9 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Ddx47Q9CWX9 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ddx47Q9CWX9 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ddx47Q9CWX9 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Ddx47Q9CWX9 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Ddx47Q9CWX9 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC17.6■□□□□ 0.41
Ddx47Q9CWX9 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ddx47Q9CWX9 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ddx47Q9CWX9 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ddx47Q9CWX9 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ddx47Q9CWX9 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ddx47Q9CWX9 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ddx47Q9CWX9 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ddx47Q9CWX9 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC17.59■□□□□ 0.41
Ddx47Q9CWX9 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC17.59■□□□□ 0.41
Ddx47Q9CWX9 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC17.59■□□□□ 0.41
Ddx47Q9CWX9 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Ddx47Q9CWX9 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC17.59■□□□□ 0.41
Ddx47Q9CWX9 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC17.59■□□□□ 0.41
Ddx47Q9CWX9 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms