Protein–RNA interactions for Protein: Q9CWS1

Rnf135, E3 ubiquitin-protein ligase RNF135, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf135Q9CWS1 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rnf135Q9CWS1 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rnf135Q9CWS1 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rnf135Q9CWS1 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC17.81■□□□□ 0.44
Rnf135Q9CWS1 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Rnf135Q9CWS1 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Rnf135Q9CWS1 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rnf135Q9CWS1 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rnf135Q9CWS1 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC17.81■□□□□ 0.44
Rnf135Q9CWS1 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rnf135Q9CWS1 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Rnf135Q9CWS1 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Rnf135Q9CWS1 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rnf135Q9CWS1 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Rnf135Q9CWS1 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rnf135Q9CWS1 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rnf135Q9CWS1 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rnf135Q9CWS1 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
Rnf135Q9CWS1 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rnf135Q9CWS1 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rnf135Q9CWS1 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Rnf135Q9CWS1 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC17.81■□□□□ 0.44
Rnf135Q9CWS1 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rnf135Q9CWS1 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rnf135Q9CWS1 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Rnf135Q9CWS1 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rnf135Q9CWS1 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17.8■□□□□ 0.44
Rnf135Q9CWS1 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rnf135Q9CWS1 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rnf135Q9CWS1 Gm15378-201ENSMUST00000121894 207 ntBASIC17.8■□□□□ 0.44
Rnf135Q9CWS1 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rnf135Q9CWS1 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
Rnf135Q9CWS1 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC17.8■□□□□ 0.44
Rnf135Q9CWS1 AC153881.1-201ENSMUST00000214448 284 ntBASIC17.8■□□□□ 0.44
Rnf135Q9CWS1 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rnf135Q9CWS1 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Rnf135Q9CWS1 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rnf135Q9CWS1 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rnf135Q9CWS1 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rnf135Q9CWS1 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Rnf135Q9CWS1 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Rnf135Q9CWS1 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rnf135Q9CWS1 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rnf135Q9CWS1 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Rnf135Q9CWS1 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Rnf135Q9CWS1 Gm10698-201ENSMUST00000182663 604 ntBASIC17.79■□□□□ 0.44
Rnf135Q9CWS1 AC166341.7-201ENSMUST00000221698 126 ntBASIC17.79■□□□□ 0.44
Rnf135Q9CWS1 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rnf135Q9CWS1 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC17.79■□□□□ 0.44
Rnf135Q9CWS1 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rnf135Q9CWS1 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rnf135Q9CWS1 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rnf135Q9CWS1 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rnf135Q9CWS1 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rnf135Q9CWS1 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Rnf135Q9CWS1 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rnf135Q9CWS1 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rnf135Q9CWS1 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rnf135Q9CWS1 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rnf135Q9CWS1 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rnf135Q9CWS1 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
Rnf135Q9CWS1 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rnf135Q9CWS1 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rnf135Q9CWS1 Gm13158-201ENSMUST00000122007 736 ntBASIC17.78■□□□□ 0.44
Rnf135Q9CWS1 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Rnf135Q9CWS1 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC17.78■□□□□ 0.44
Rnf135Q9CWS1 Gm29994-201ENSMUST00000195495 1193 ntBASIC17.78■□□□□ 0.44
Rnf135Q9CWS1 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Rnf135Q9CWS1 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rnf135Q9CWS1 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rnf135Q9CWS1 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rnf135Q9CWS1 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Rnf135Q9CWS1 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rnf135Q9CWS1 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rnf135Q9CWS1 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Rnf135Q9CWS1 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
Rnf135Q9CWS1 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rnf135Q9CWS1 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.77■□□□□ 0.44
Rnf135Q9CWS1 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rnf135Q9CWS1 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rnf135Q9CWS1 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rnf135Q9CWS1 Gm11841-201ENSMUST00000117060 1963 ntBASIC17.77■□□□□ 0.44
Rnf135Q9CWS1 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rnf135Q9CWS1 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rnf135Q9CWS1 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC17.77■□□□□ 0.44
Rnf135Q9CWS1 Gm42545-201ENSMUST00000202755 922 ntBASIC17.77■□□□□ 0.44
Rnf135Q9CWS1 Gm18025-201ENSMUST00000221733 862 ntBASIC17.77■□□□□ 0.44
Rnf135Q9CWS1 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Rnf135Q9CWS1 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Rnf135Q9CWS1 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Rnf135Q9CWS1 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Rnf135Q9CWS1 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Rnf135Q9CWS1 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC17.77■□□□□ 0.43
Rnf135Q9CWS1 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Rnf135Q9CWS1 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
Rnf135Q9CWS1 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Rnf135Q9CWS1 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rnf135Q9CWS1 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rnf135Q9CWS1 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Rnf135Q9CWS1 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms