Protein–RNA interactions for Protein: Q9CUU3

Sycp2, Synaptonemal complex protein 2, mousemouse

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sycp2Q9CUU3 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
Sycp2Q9CUU3 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
Sycp2Q9CUU3 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
Sycp2Q9CUU3 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC31.3■■■□□ 2.6
Sycp2Q9CUU3 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC31.3■■■□□ 2.6
Sycp2Q9CUU3 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC31.3■■■□□ 2.6
Sycp2Q9CUU3 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
Sycp2Q9CUU3 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
Sycp2Q9CUU3 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC31.3■■■□□ 2.6
Sycp2Q9CUU3 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC31.3■■■□□ 2.6
Sycp2Q9CUU3 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
Sycp2Q9CUU3 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC31.3■■■□□ 2.6
Sycp2Q9CUU3 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
Sycp2Q9CUU3 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
Sycp2Q9CUU3 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
Sycp2Q9CUU3 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
Sycp2Q9CUU3 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC31.29■■■□□ 2.6
Sycp2Q9CUU3 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
Sycp2Q9CUU3 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC31.29■■■□□ 2.6
Sycp2Q9CUU3 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC31.29■■■□□ 2.6
Sycp2Q9CUU3 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
Sycp2Q9CUU3 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
Sycp2Q9CUU3 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
Sycp2Q9CUU3 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC31.28■■■□□ 2.6
Sycp2Q9CUU3 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
Sycp2Q9CUU3 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC31.28■■■□□ 2.6
Sycp2Q9CUU3 AC122901.1-201ENSMUST00000214203 1790 ntBASIC31.27■■■□□ 2.6
Sycp2Q9CUU3 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
Sycp2Q9CUU3 Gm25745-201ENSMUST00000174945 133 ntBASIC31.27■■■□□ 2.6
Sycp2Q9CUU3 Gm7506-201ENSMUST00000207758 815 ntBASIC31.27■■■□□ 2.6
Sycp2Q9CUU3 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC31.27■■■□□ 2.6
Sycp2Q9CUU3 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Sycp2Q9CUU3 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC31.26■■■□□ 2.6
Sycp2Q9CUU3 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.6
Sycp2Q9CUU3 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.6
Sycp2Q9CUU3 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC31.26■■■□□ 2.59
Sycp2Q9CUU3 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
Sycp2Q9CUU3 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
Sycp2Q9CUU3 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
Sycp2Q9CUU3 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC31.26■■■□□ 2.59
Sycp2Q9CUU3 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC31.25■■■□□ 2.59
Sycp2Q9CUU3 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC31.25■■■□□ 2.59
Sycp2Q9CUU3 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Sycp2Q9CUU3 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Sycp2Q9CUU3 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC31.25■■■□□ 2.59
Sycp2Q9CUU3 AC090659.1-201ENSMUST00000224334 768 ntBASIC31.25■■■□□ 2.59
Sycp2Q9CUU3 Chchd1-203ENSMUST00000224633 557 ntBASIC31.25■■■□□ 2.59
Sycp2Q9CUU3 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
Sycp2Q9CUU3 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
Sycp2Q9CUU3 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Sycp2Q9CUU3 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC31.25■■■□□ 2.59
Sycp2Q9CUU3 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Sycp2Q9CUU3 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Sycp2Q9CUU3 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC31.25■■■□□ 2.59
Sycp2Q9CUU3 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Sycp2Q9CUU3 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC31.24■■■□□ 2.59
Sycp2Q9CUU3 Gm37584-201ENSMUST00000193595 1290 ntBASIC31.24■■■□□ 2.59
Sycp2Q9CUU3 Gm6089-201ENSMUST00000197666 938 ntBASIC31.24■■■□□ 2.59
Sycp2Q9CUU3 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Sycp2Q9CUU3 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC31.24■■■□□ 2.59
Sycp2Q9CUU3 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Sycp2Q9CUU3 Gm45141-201ENSMUST00000206502 1888 ntBASIC31.24■■■□□ 2.59
Sycp2Q9CUU3 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
Sycp2Q9CUU3 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
Sycp2Q9CUU3 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Sycp2Q9CUU3 Gm26308-201ENSMUST00000157768 69 ntBASIC31.24■■■□□ 2.59
Sycp2Q9CUU3 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC31.24■■■□□ 2.59
Sycp2Q9CUU3 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC31.24■■■□□ 2.59
Sycp2Q9CUU3 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC31.23■■■□□ 2.59
Sycp2Q9CUU3 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC31.23■■■□□ 2.59
Sycp2Q9CUU3 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
Sycp2Q9CUU3 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
Sycp2Q9CUU3 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
Sycp2Q9CUU3 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
Sycp2Q9CUU3 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC31.22■■■□□ 2.59
Sycp2Q9CUU3 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC31.22■■■□□ 2.59
Sycp2Q9CUU3 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC31.22■■■□□ 2.59
Sycp2Q9CUU3 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC31.22■■■□□ 2.59
Sycp2Q9CUU3 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC31.22■■■□□ 2.59
Sycp2Q9CUU3 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC31.22■■■□□ 2.59
Sycp2Q9CUU3 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
Sycp2Q9CUU3 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC31.22■■■□□ 2.59
Sycp2Q9CUU3 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC31.21■■■□□ 2.59
Sycp2Q9CUU3 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
Sycp2Q9CUU3 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC31.21■■■□□ 2.59
Sycp2Q9CUU3 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC31.21■■■□□ 2.59
Sycp2Q9CUU3 Gm15920-201ENSMUST00000118998 402 ntBASIC31.21■■■□□ 2.59
Sycp2Q9CUU3 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
Sycp2Q9CUU3 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
Sycp2Q9CUU3 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
Sycp2Q9CUU3 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC31.21■■■□□ 2.59
Sycp2Q9CUU3 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC31.21■■■□□ 2.59
Sycp2Q9CUU3 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
Sycp2Q9CUU3 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
Sycp2Q9CUU3 AC158982.1-201ENSMUST00000228377 901 ntBASIC31.2■■■□□ 2.59
Sycp2Q9CUU3 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
Sycp2Q9CUU3 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC31.2■■■□□ 2.59
Sycp2Q9CUU3 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC31.2■■■□□ 2.58
Sycp2Q9CUU3 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
Sycp2Q9CUU3 Gm5648-201ENSMUST00000122244 1587 ntBASIC31.19■■■□□ 2.58
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms