Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim33Q99PP7 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim33Q99PP7 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim33Q99PP7 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim33Q99PP7 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Trim33Q99PP7 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim33Q99PP7 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim33Q99PP7 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim33Q99PP7 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim33Q99PP7 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC16.95■□□□□ 0.3
Trim33Q99PP7 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim33Q99PP7 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim33Q99PP7 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim33Q99PP7 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim33Q99PP7 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC16.94■□□□□ 0.3
Trim33Q99PP7 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC16.94■□□□□ 0.3
Trim33Q99PP7 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC16.94■□□□□ 0.3
Trim33Q99PP7 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trim33Q99PP7 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC16.94■□□□□ 0.3
Trim33Q99PP7 Mir5122-201ENSMUST00000175004 89 ntBASIC16.94■□□□□ 0.3
Trim33Q99PP7 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim33Q99PP7 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim33Q99PP7 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim33Q99PP7 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim33Q99PP7 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim33Q99PP7 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim33Q99PP7 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim33Q99PP7 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Trim33Q99PP7 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim33Q99PP7 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim33Q99PP7 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim33Q99PP7 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim33Q99PP7 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
Trim33Q99PP7 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC16.93■□□□□ 0.3
Trim33Q99PP7 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC16.93■□□□□ 0.3
Trim33Q99PP7 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim33Q99PP7 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim33Q99PP7 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trim33Q99PP7 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trim33Q99PP7 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim33Q99PP7 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim33Q99PP7 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Trim33Q99PP7 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC16.93■□□□□ 0.3
Trim33Q99PP7 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC16.93■□□□□ 0.3
Trim33Q99PP7 Gm45244-201ENSMUST00000211328 2200 ntBASIC16.93■□□□□ 0.3
Trim33Q99PP7 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim33Q99PP7 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim33Q99PP7 Fcho2-208ENSMUST00000224992 2964 ntBASIC16.92■□□□□ 0.3
Trim33Q99PP7 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim33Q99PP7 Zcchc6-207ENSMUST00000225576 2499 ntBASIC16.92■□□□□ 0.3
Trim33Q99PP7 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim33Q99PP7 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim33Q99PP7 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim33Q99PP7 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
Trim33Q99PP7 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trim33Q99PP7 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC16.92■□□□□ 0.3
Trim33Q99PP7 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
Trim33Q99PP7 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC16.92■□□□□ 0.3
Trim33Q99PP7 Timm23-208ENSMUST00000226683 750 ntBASIC16.92■□□□□ 0.3
Trim33Q99PP7 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim33Q99PP7 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim33Q99PP7 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim33Q99PP7 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim33Q99PP7 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trim33Q99PP7 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Trim33Q99PP7 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim33Q99PP7 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Trim33Q99PP7 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim33Q99PP7 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim33Q99PP7 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim33Q99PP7 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Trim33Q99PP7 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trim33Q99PP7 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim33Q99PP7 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Trim33Q99PP7 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim33Q99PP7 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim33Q99PP7 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trim33Q99PP7 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC16.91■□□□□ 0.3
Trim33Q99PP7 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim33Q99PP7 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim33Q99PP7 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC16.91■□□□□ 0.3
Trim33Q99PP7 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim33Q99PP7 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim33Q99PP7 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim33Q99PP7 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim33Q99PP7 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Trim33Q99PP7 Gm12085-201ENSMUST00000119263 940 ntBASIC16.91■□□□□ 0.3
Trim33Q99PP7 Gm24841-201ENSMUST00000158676 357 ntBASIC16.91■□□□□ 0.3
Trim33Q99PP7 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trim33Q99PP7 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trim33Q99PP7 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trim33Q99PP7 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC16.91■□□□□ 0.3
Trim33Q99PP7 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trim33Q99PP7 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trim33Q99PP7 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim33Q99PP7 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim33Q99PP7 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim33Q99PP7 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim33Q99PP7 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim33Q99PP7 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms