Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC18.37■□□□□ 0.53
Tlr3Q99MB1 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Tlr3Q99MB1 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tlr3Q99MB1 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tlr3Q99MB1 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tlr3Q99MB1 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tlr3Q99MB1 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tlr3Q99MB1 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
Tlr3Q99MB1 Gm17661-201ENSMUST00000170317 270 ntBASIC18.37■□□□□ 0.53
Tlr3Q99MB1 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tlr3Q99MB1 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Tlr3Q99MB1 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tlr3Q99MB1 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tlr3Q99MB1 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Tlr3Q99MB1 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Tlr3Q99MB1 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tlr3Q99MB1 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tlr3Q99MB1 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tlr3Q99MB1 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tlr3Q99MB1 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tlr3Q99MB1 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Tlr3Q99MB1 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC18.36■□□□□ 0.53
Tlr3Q99MB1 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Tlr3Q99MB1 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC18.36■□□□□ 0.53
Tlr3Q99MB1 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tlr3Q99MB1 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tlr3Q99MB1 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tlr3Q99MB1 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tlr3Q99MB1 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tlr3Q99MB1 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tlr3Q99MB1 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tlr3Q99MB1 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tlr3Q99MB1 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tlr3Q99MB1 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tlr3Q99MB1 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Tlr3Q99MB1 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
Tlr3Q99MB1 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tlr3Q99MB1 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tlr3Q99MB1 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC18.35■□□□□ 0.53
Tlr3Q99MB1 Odf3b-204ENSMUST00000227834 930 ntBASIC18.35■□□□□ 0.53
Tlr3Q99MB1 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tlr3Q99MB1 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tlr3Q99MB1 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC18.35■□□□□ 0.53
Tlr3Q99MB1 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Tlr3Q99MB1 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tlr3Q99MB1 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tlr3Q99MB1 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC18.34■□□□□ 0.53
Tlr3Q99MB1 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tlr3Q99MB1 Gm7638-201ENSMUST00000121348 967 ntBASIC18.34■□□□□ 0.53
Tlr3Q99MB1 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Tlr3Q99MB1 Otx2os1-204ENSMUST00000227221 751 ntBASIC18.34■□□□□ 0.53
Tlr3Q99MB1 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tlr3Q99MB1 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Tlr3Q99MB1 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Tlr3Q99MB1 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tlr3Q99MB1 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tlr3Q99MB1 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tlr3Q99MB1 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tlr3Q99MB1 Gm16499-203ENSMUST00000204633 2177 ntBASIC18.34■□□□□ 0.53
Tlr3Q99MB1 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tlr3Q99MB1 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tlr3Q99MB1 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tlr3Q99MB1 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.53
Tlr3Q99MB1 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Tlr3Q99MB1 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Tlr3Q99MB1 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.53
Tlr3Q99MB1 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Tlr3Q99MB1 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Tlr3Q99MB1 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC18.33■□□□□ 0.53
Tlr3Q99MB1 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Tlr3Q99MB1 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tlr3Q99MB1 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC18.33■□□□□ 0.52
Tlr3Q99MB1 Gm9731-201ENSMUST00000209480 747 ntBASIC18.33■□□□□ 0.52
Tlr3Q99MB1 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tlr3Q99MB1 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tlr3Q99MB1 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tlr3Q99MB1 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tlr3Q99MB1 Gm15635-204ENSMUST00000208024 2539 ntBASIC18.32■□□□□ 0.52
Tlr3Q99MB1 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Tlr3Q99MB1 Gm43294-201ENSMUST00000202850 2490 ntBASIC18.32■□□□□ 0.52
Tlr3Q99MB1 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Tlr3Q99MB1 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tlr3Q99MB1 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tlr3Q99MB1 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC18.32■□□□□ 0.52
Tlr3Q99MB1 Gm10231-201ENSMUST00000181584 441 ntBASIC18.32■□□□□ 0.52
Tlr3Q99MB1 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tlr3Q99MB1 Gm10175-202ENSMUST00000208752 441 ntBASIC18.32■□□□□ 0.52
Tlr3Q99MB1 Arhgef4-208ENSMUST00000211073 171 ntBASIC18.32■□□□□ 0.52
Tlr3Q99MB1 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC18.32■□□□□ 0.52
Tlr3Q99MB1 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tlr3Q99MB1 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tlr3Q99MB1 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tlr3Q99MB1 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tlr3Q99MB1 Tfap2a-209ENSMUST00000225180 1828 ntBASIC18.32■□□□□ 0.52
Tlr3Q99MB1 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC18.32■□□□□ 0.52
Tlr3Q99MB1 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tlr3Q99MB1 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tlr3Q99MB1 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tlr3Q99MB1 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tlr3Q99MB1 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms