Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 AC166341.7-201ENSMUST00000221698 126 ntBASIC15.25■□□□□ 0.03
Pcdhga3Q91XY5 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhga3Q91XY5 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhga3Q91XY5 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhga3Q91XY5 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhga3Q91XY5 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Pcdhga3Q91XY5 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhga3Q91XY5 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhga3Q91XY5 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Pcdhga3Q91XY5 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhga3Q91XY5 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhga3Q91XY5 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC15.24■□□□□ 0.03
Pcdhga3Q91XY5 Gm42545-201ENSMUST00000202755 922 ntBASIC15.24■□□□□ 0.03
Pcdhga3Q91XY5 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhga3Q91XY5 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC15.24■□□□□ 0.03
Pcdhga3Q91XY5 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC15.24■□□□□ 0.03
Pcdhga3Q91XY5 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhga3Q91XY5 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhga3Q91XY5 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhga3Q91XY5 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhga3Q91XY5 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhga3Q91XY5 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC15.24■□□□□ 0.03
Pcdhga3Q91XY5 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhga3Q91XY5 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhga3Q91XY5 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhga3Q91XY5 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhga3Q91XY5 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhga3Q91XY5 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhga3Q91XY5 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhga3Q91XY5 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhga3Q91XY5 Gm13401-201ENSMUST00000117074 291 ntBASIC15.23■□□□□ 0.03
Pcdhga3Q91XY5 Gm15378-201ENSMUST00000121894 207 ntBASIC15.23■□□□□ 0.03
Pcdhga3Q91XY5 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhga3Q91XY5 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC15.23■□□□□ 0.03
Pcdhga3Q91XY5 Gm6576-201ENSMUST00000169678 883 ntBASIC15.23■□□□□ 0.03
Pcdhga3Q91XY5 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC15.23■□□□□ 0.03
Pcdhga3Q91XY5 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhga3Q91XY5 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC15.23■□□□□ 0.03
Pcdhga3Q91XY5 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhga3Q91XY5 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhga3Q91XY5 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhga3Q91XY5 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Pcdhga3Q91XY5 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhga3Q91XY5 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhga3Q91XY5 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Pcdhga3Q91XY5 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhga3Q91XY5 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhga3Q91XY5 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhga3Q91XY5 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Pcdhga3Q91XY5 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhga3Q91XY5 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Pcdhga3Q91XY5 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhga3Q91XY5 Gm15743-202ENSMUST00000182690 1901 ntBASIC15.22■□□□□ 0.03
Pcdhga3Q91XY5 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhga3Q91XY5 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Pcdhga3Q91XY5 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC15.22■□□□□ 0.03
Pcdhga3Q91XY5 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhga3Q91XY5 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhga3Q91XY5 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhga3Q91XY5 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
Pcdhga3Q91XY5 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhga3Q91XY5 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhga3Q91XY5 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhga3Q91XY5 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhga3Q91XY5 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC15.22■□□□□ 0.03
Pcdhga3Q91XY5 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhga3Q91XY5 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhga3Q91XY5 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhga3Q91XY5 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Pcdhga3Q91XY5 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhga3Q91XY5 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Pcdhga3Q91XY5 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhga3Q91XY5 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhga3Q91XY5 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhga3Q91XY5 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhga3Q91XY5 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhga3Q91XY5 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhga3Q91XY5 Gm43272-201ENSMUST00000200599 1584 ntBASIC15.21■□□□□ 0.03
Pcdhga3Q91XY5 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
Pcdhga3Q91XY5 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhga3Q91XY5 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Pcdhga3Q91XY5 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhga3Q91XY5 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhga3Q91XY5 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
Pcdhga3Q91XY5 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
Pcdhga3Q91XY5 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Pcdhga3Q91XY5 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Pcdhga3Q91XY5 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Pcdhga3Q91XY5 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhga3Q91XY5 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Pcdhga3Q91XY5 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhga3Q91XY5 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Pcdhga3Q91XY5 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Pcdhga3Q91XY5 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Pcdhga3Q91XY5 Gm13168-201ENSMUST00000121771 632 ntBASIC15.2■□□□□ 0.02
Pcdhga3Q91XY5 Gm12382-201ENSMUST00000122005 922 ntBASIC15.2■□□□□ 0.02
Pcdhga3Q91XY5 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC15.2■□□□□ 0.02
Pcdhga3Q91XY5 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhga3Q91XY5 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
Pcdhga3Q91XY5 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms