Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhga4Q91XY4 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhga4Q91XY4 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhga4Q91XY4 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhga4Q91XY4 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhga4Q91XY4 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhga4Q91XY4 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhga4Q91XY4 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
Pcdhga4Q91XY4 Gm43294-201ENSMUST00000202850 2490 ntBASIC16.84■□□□□ 0.29
Pcdhga4Q91XY4 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Pcdhga4Q91XY4 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Pcdhga4Q91XY4 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhga4Q91XY4 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Pcdhga4Q91XY4 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhga4Q91XY4 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Pcdhga4Q91XY4 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhga4Q91XY4 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhga4Q91XY4 Mir7071-201ENSMUST00000184847 69 ntBASIC16.83■□□□□ 0.28
Pcdhga4Q91XY4 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC16.83■□□□□ 0.28
Pcdhga4Q91XY4 Gm9694-201ENSMUST00000193347 1189 ntBASIC16.83■□□□□ 0.28
Pcdhga4Q91XY4 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhga4Q91XY4 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhga4Q91XY4 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhga4Q91XY4 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhga4Q91XY4 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhga4Q91XY4 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhga4Q91XY4 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhga4Q91XY4 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhga4Q91XY4 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhga4Q91XY4 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhga4Q91XY4 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
Pcdhga4Q91XY4 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhga4Q91XY4 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhga4Q91XY4 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC16.82■□□□□ 0.28
Pcdhga4Q91XY4 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhga4Q91XY4 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhga4Q91XY4 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhga4Q91XY4 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhga4Q91XY4 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Pcdhga4Q91XY4 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhga4Q91XY4 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhga4Q91XY4 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC16.82■□□□□ 0.28
Pcdhga4Q91XY4 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC16.82■□□□□ 0.28
Pcdhga4Q91XY4 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhga4Q91XY4 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Pcdhga4Q91XY4 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhga4Q91XY4 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC16.82■□□□□ 0.28
Pcdhga4Q91XY4 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhga4Q91XY4 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Pcdhga4Q91XY4 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhga4Q91XY4 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhga4Q91XY4 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhga4Q91XY4 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Pcdhga4Q91XY4 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhga4Q91XY4 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhga4Q91XY4 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Pcdhga4Q91XY4 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhga4Q91XY4 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhga4Q91XY4 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhga4Q91XY4 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Pcdhga4Q91XY4 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhga4Q91XY4 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhga4Q91XY4 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Pcdhga4Q91XY4 Gm9484-201ENSMUST00000195892 1159 ntBASIC16.81■□□□□ 0.28
Pcdhga4Q91XY4 AC135963.1-201ENSMUST00000211640 717 ntBASIC16.81■□□□□ 0.28
Pcdhga4Q91XY4 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhga4Q91XY4 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhga4Q91XY4 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhga4Q91XY4 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhga4Q91XY4 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhga4Q91XY4 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhga4Q91XY4 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhga4Q91XY4 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
Pcdhga4Q91XY4 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Pcdhga4Q91XY4 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhga4Q91XY4 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhga4Q91XY4 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhga4Q91XY4 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhga4Q91XY4 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhga4Q91XY4 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhga4Q91XY4 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC16.8■□□□□ 0.28
Pcdhga4Q91XY4 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhga4Q91XY4 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhga4Q91XY4 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC16.8■□□□□ 0.28
Pcdhga4Q91XY4 Gm3375-201ENSMUST00000203929 796 ntBASIC16.8■□□□□ 0.28
Pcdhga4Q91XY4 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhga4Q91XY4 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhga4Q91XY4 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC16.8■□□□□ 0.28
Pcdhga4Q91XY4 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhga4Q91XY4 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhga4Q91XY4 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhga4Q91XY4 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhga4Q91XY4 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhga4Q91XY4 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhga4Q91XY4 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhga4Q91XY4 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhga4Q91XY4 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhga4Q91XY4 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhga4Q91XY4 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhga4Q91XY4 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms