Protein–RNA interactions for Protein: Q91XX9

Pcdhga9, Protocadherin gamma A9, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga9Q91XX9 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhga9Q91XX9 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Pcdhga9Q91XX9 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhga9Q91XX9 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC16.93■□□□□ 0.3
Pcdhga9Q91XX9 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhga9Q91XX9 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhga9Q91XX9 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhga9Q91XX9 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
Pcdhga9Q91XX9 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhga9Q91XX9 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC16.93■□□□□ 0.3
Pcdhga9Q91XX9 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhga9Q91XX9 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhga9Q91XX9 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhga9Q91XX9 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhga9Q91XX9 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC16.93■□□□□ 0.3
Pcdhga9Q91XX9 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhga9Q91XX9 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhga9Q91XX9 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhga9Q91XX9 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhga9Q91XX9 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC16.92■□□□□ 0.3
Pcdhga9Q91XX9 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhga9Q91XX9 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC16.92■□□□□ 0.3
Pcdhga9Q91XX9 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhga9Q91XX9 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC16.92■□□□□ 0.3
Pcdhga9Q91XX9 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC16.92■□□□□ 0.3
Pcdhga9Q91XX9 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhga9Q91XX9 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhga9Q91XX9 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhga9Q91XX9 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC16.92■□□□□ 0.3
Pcdhga9Q91XX9 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Pcdhga9Q91XX9 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhga9Q91XX9 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhga9Q91XX9 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhga9Q91XX9 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhga9Q91XX9 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Pcdhga9Q91XX9 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhga9Q91XX9 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC16.91■□□□□ 0.3
Pcdhga9Q91XX9 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhga9Q91XX9 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhga9Q91XX9 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhga9Q91XX9 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhga9Q91XX9 Gm17661-201ENSMUST00000170317 270 ntBASIC16.91■□□□□ 0.3
Pcdhga9Q91XX9 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhga9Q91XX9 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC16.91■□□□□ 0.3
Pcdhga9Q91XX9 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Pcdhga9Q91XX9 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhga9Q91XX9 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC16.91■□□□□ 0.3
Pcdhga9Q91XX9 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhga9Q91XX9 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Pcdhga9Q91XX9 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Pcdhga9Q91XX9 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhga9Q91XX9 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhga9Q91XX9 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC16.9■□□□□ 0.3
Pcdhga9Q91XX9 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdhga9Q91XX9 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdhga9Q91XX9 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdhga9Q91XX9 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdhga9Q91XX9 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdhga9Q91XX9 Gm7638-201ENSMUST00000121348 967 ntBASIC16.9■□□□□ 0.3
Pcdhga9Q91XX9 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC16.9■□□□□ 0.3
Pcdhga9Q91XX9 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdhga9Q91XX9 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Pcdhga9Q91XX9 Gm7889-201ENSMUST00000185591 958 ntBASIC16.9■□□□□ 0.3
Pcdhga9Q91XX9 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdhga9Q91XX9 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdhga9Q91XX9 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdhga9Q91XX9 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdhga9Q91XX9 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Pcdhga9Q91XX9 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Pcdhga9Q91XX9 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdhga9Q91XX9 Gm42900-201ENSMUST00000197184 2167 ntBASIC16.89■□□□□ 0.3
Pcdhga9Q91XX9 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC16.89■□□□□ 0.3
Pcdhga9Q91XX9 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Pcdhga9Q91XX9 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC16.89■□□□□ 0.29
Pcdhga9Q91XX9 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Pcdhga9Q91XX9 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhga9Q91XX9 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhga9Q91XX9 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhga9Q91XX9 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhga9Q91XX9 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhga9Q91XX9 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhga9Q91XX9 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhga9Q91XX9 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhga9Q91XX9 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC16.89■□□□□ 0.29
Pcdhga9Q91XX9 Gm9731-201ENSMUST00000209480 747 ntBASIC16.89■□□□□ 0.29
Pcdhga9Q91XX9 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC16.89■□□□□ 0.29
Pcdhga9Q91XX9 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC16.89■□□□□ 0.29
Pcdhga9Q91XX9 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhga9Q91XX9 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhga9Q91XX9 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhga9Q91XX9 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhga9Q91XX9 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhga9Q91XX9 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhga9Q91XX9 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhga9Q91XX9 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhga9Q91XX9 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhga9Q91XX9 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhga9Q91XX9 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhga9Q91XX9 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhga9Q91XX9 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms