Protein–RNA interactions for Protein: Q91XX8

Pcdhgb1, Protocadherin gamma B1, mousemouse

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb1Q91XX8 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhgb1Q91XX8 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Pcdhgb1Q91XX8 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhgb1Q91XX8 Gm6728-201ENSMUST00000178117 1065 ntBASIC17.78■□□□□ 0.44
Pcdhgb1Q91XX8 Gm18101-201ENSMUST00000215769 548 ntBASIC17.78■□□□□ 0.44
Pcdhgb1Q91XX8 AC134329.2-201ENSMUST00000217897 428 ntBASIC17.78■□□□□ 0.44
Pcdhgb1Q91XX8 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC17.78■□□□□ 0.44
Pcdhgb1Q91XX8 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhgb1Q91XX8 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhgb1Q91XX8 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC17.78■□□□□ 0.44
Pcdhgb1Q91XX8 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhgb1Q91XX8 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhgb1Q91XX8 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
Pcdhgb1Q91XX8 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Pcdhgb1Q91XX8 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhgb1Q91XX8 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhgb1Q91XX8 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhgb1Q91XX8 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhgb1Q91XX8 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhgb1Q91XX8 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhgb1Q91XX8 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhgb1Q91XX8 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhgb1Q91XX8 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhgb1Q91XX8 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhgb1Q91XX8 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Pcdhgb1Q91XX8 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC17.77■□□□□ 0.44
Pcdhgb1Q91XX8 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhgb1Q91XX8 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.77■□□□□ 0.43
Pcdhgb1Q91XX8 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
Pcdhgb1Q91XX8 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Pcdhgb1Q91XX8 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pcdhgb1Q91XX8 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Pcdhgb1Q91XX8 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhgb1Q91XX8 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhgb1Q91XX8 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Pcdhgb1Q91XX8 Gm19721-201ENSMUST00000195284 1764 ntBASIC17.76■□□□□ 0.43
Pcdhgb1Q91XX8 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.76■□□□□ 0.43
Pcdhgb1Q91XX8 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhgb1Q91XX8 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC17.76■□□□□ 0.43
Pcdhgb1Q91XX8 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Pcdhgb1Q91XX8 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhgb1Q91XX8 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhgb1Q91XX8 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.76■□□□□ 0.43
Pcdhgb1Q91XX8 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhgb1Q91XX8 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhgb1Q91XX8 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhgb1Q91XX8 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhgb1Q91XX8 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhgb1Q91XX8 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhgb1Q91XX8 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhgb1Q91XX8 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhgb1Q91XX8 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhgb1Q91XX8 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhgb1Q91XX8 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.75■□□□□ 0.43
Pcdhgb1Q91XX8 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhgb1Q91XX8 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC17.75■□□□□ 0.43
Pcdhgb1Q91XX8 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Pcdhgb1Q91XX8 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhgb1Q91XX8 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.75■□□□□ 0.43
Pcdhgb1Q91XX8 Spsb2-203ENSMUST00000112473 1322 ntBASIC17.75■□□□□ 0.43
Pcdhgb1Q91XX8 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhgb1Q91XX8 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhgb1Q91XX8 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhgb1Q91XX8 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhgb1Q91XX8 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhgb1Q91XX8 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhgb1Q91XX8 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC17.75■□□□□ 0.43
Pcdhgb1Q91XX8 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhgb1Q91XX8 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhgb1Q91XX8 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhgb1Q91XX8 Gm17661-201ENSMUST00000170317 270 ntBASIC17.75■□□□□ 0.43
Pcdhgb1Q91XX8 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhgb1Q91XX8 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhgb1Q91XX8 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhgb1Q91XX8 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.74■□□□□ 0.43
Pcdhgb1Q91XX8 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhgb1Q91XX8 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhgb1Q91XX8 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhgb1Q91XX8 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhgb1Q91XX8 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Pcdhgb1Q91XX8 AA414768-201ENSMUST00000121924 1257 ntBASIC17.74■□□□□ 0.43
Pcdhgb1Q91XX8 Gm13474-201ENSMUST00000122466 815 ntBASIC17.74■□□□□ 0.43
Pcdhgb1Q91XX8 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhgb1Q91XX8 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Pcdhgb1Q91XX8 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Pcdhgb1Q91XX8 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhgb1Q91XX8 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC17.74■□□□□ 0.43
Pcdhgb1Q91XX8 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhgb1Q91XX8 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Pcdhgb1Q91XX8 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhgb1Q91XX8 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhgb1Q91XX8 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhgb1Q91XX8 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhgb1Q91XX8 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhgb1Q91XX8 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhgb1Q91XX8 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Pcdhgb1Q91XX8 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhgb1Q91XX8 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhgb1Q91XX8 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhgb1Q91XX8 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms