Protein–RNA interactions for Protein: Q91XX7

Pcdhgb2, Protocadherin gamma B2, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb2Q91XX7 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhgb2Q91XX7 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhgb2Q91XX7 Gm11620-201ENSMUST00000118770 1845 ntBASIC16.1■□□□□ 0.17
Pcdhgb2Q91XX7 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhgb2Q91XX7 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhgb2Q91XX7 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhgb2Q91XX7 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhgb2Q91XX7 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhgb2Q91XX7 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhgb2Q91XX7 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC16.09■□□□□ 0.17
Pcdhgb2Q91XX7 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhgb2Q91XX7 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhgb2Q91XX7 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhgb2Q91XX7 CT010478.1-201ENSMUST00000220747 2787 ntBASIC16.09■□□□□ 0.17
Pcdhgb2Q91XX7 Gm19721-201ENSMUST00000195284 1764 ntBASIC16.09■□□□□ 0.17
Pcdhgb2Q91XX7 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhgb2Q91XX7 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhgb2Q91XX7 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhgb2Q91XX7 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhgb2Q91XX7 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhgb2Q91XX7 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhgb2Q91XX7 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhgb2Q91XX7 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC16.09■□□□□ 0.17
Pcdhgb2Q91XX7 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC16.09■□□□□ 0.17
Pcdhgb2Q91XX7 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdhgb2Q91XX7 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdhgb2Q91XX7 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdhgb2Q91XX7 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdhgb2Q91XX7 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdhgb2Q91XX7 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdhgb2Q91XX7 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhgb2Q91XX7 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC16.08■□□□□ 0.16
Pcdhgb2Q91XX7 Gm11927-201ENSMUST00000118472 759 ntBASIC16.08■□□□□ 0.16
Pcdhgb2Q91XX7 Mir6349-201ENSMUST00000184059 97 ntBASIC16.08■□□□□ 0.16
Pcdhgb2Q91XX7 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Pcdhgb2Q91XX7 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhgb2Q91XX7 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhgb2Q91XX7 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhgb2Q91XX7 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhgb2Q91XX7 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhgb2Q91XX7 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhgb2Q91XX7 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhgb2Q91XX7 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhgb2Q91XX7 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhgb2Q91XX7 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhgb2Q91XX7 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Pcdhgb2Q91XX7 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhgb2Q91XX7 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhgb2Q91XX7 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhgb2Q91XX7 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhgb2Q91XX7 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhgb2Q91XX7 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC16.07■□□□□ 0.16
Pcdhgb2Q91XX7 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhgb2Q91XX7 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhgb2Q91XX7 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhgb2Q91XX7 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhgb2Q91XX7 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhgb2Q91XX7 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhgb2Q91XX7 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhgb2Q91XX7 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhgb2Q91XX7 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Pcdhgb2Q91XX7 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhgb2Q91XX7 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhgb2Q91XX7 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
Pcdhgb2Q91XX7 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhgb2Q91XX7 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhgb2Q91XX7 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhgb2Q91XX7 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhgb2Q91XX7 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhgb2Q91XX7 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC16.06■□□□□ 0.16
Pcdhgb2Q91XX7 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhgb2Q91XX7 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhgb2Q91XX7 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
Pcdhgb2Q91XX7 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhgb2Q91XX7 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhgb2Q91XX7 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Pcdhgb2Q91XX7 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhgb2Q91XX7 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhgb2Q91XX7 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
Pcdhgb2Q91XX7 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhgb2Q91XX7 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhgb2Q91XX7 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC16.06■□□□□ 0.16
Pcdhgb2Q91XX7 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhgb2Q91XX7 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhgb2Q91XX7 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhgb2Q91XX7 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhgb2Q91XX7 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhgb2Q91XX7 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhgb2Q91XX7 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhgb2Q91XX7 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhgb2Q91XX7 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Pcdhgb2Q91XX7 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhgb2Q91XX7 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC16.05■□□□□ 0.16
Pcdhgb2Q91XX7 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhgb2Q91XX7 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhgb2Q91XX7 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhgb2Q91XX7 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhgb2Q91XX7 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhgb2Q91XX7 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhgb2Q91XX7 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms