Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Gm5828-201ENSMUST00000071842 1860 ntBASIC16.9■□□□□ 0.3
Vsx1Q91V10 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Vsx1Q91V10 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vsx1Q91V10 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vsx1Q91V10 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Vsx1Q91V10 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vsx1Q91V10 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Vsx1Q91V10 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Vsx1Q91V10 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Vsx1Q91V10 Gm45328-201ENSMUST00000210942 917 ntBASIC16.9■□□□□ 0.3
Vsx1Q91V10 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Vsx1Q91V10 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC16.9■□□□□ 0.3
Vsx1Q91V10 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC16.9■□□□□ 0.3
Vsx1Q91V10 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vsx1Q91V10 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Vsx1Q91V10 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vsx1Q91V10 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Vsx1Q91V10 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Vsx1Q91V10 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC16.89■□□□□ 0.3
Vsx1Q91V10 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Vsx1Q91V10 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Vsx1Q91V10 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vsx1Q91V10 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC16.89■□□□□ 0.29
Vsx1Q91V10 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vsx1Q91V10 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vsx1Q91V10 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vsx1Q91V10 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Vsx1Q91V10 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Vsx1Q91V10 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC16.89■□□□□ 0.29
Vsx1Q91V10 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vsx1Q91V10 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
Vsx1Q91V10 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vsx1Q91V10 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vsx1Q91V10 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Vsx1Q91V10 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vsx1Q91V10 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vsx1Q91V10 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vsx1Q91V10 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Vsx1Q91V10 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vsx1Q91V10 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vsx1Q91V10 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vsx1Q91V10 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vsx1Q91V10 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vsx1Q91V10 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vsx1Q91V10 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vsx1Q91V10 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Vsx1Q91V10 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vsx1Q91V10 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Vsx1Q91V10 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Vsx1Q91V10 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vsx1Q91V10 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vsx1Q91V10 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Vsx1Q91V10 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vsx1Q91V10 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC16.88■□□□□ 0.29
Vsx1Q91V10 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Vsx1Q91V10 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC16.88■□□□□ 0.29
Vsx1Q91V10 Gm27525-201ENSMUST00000184465 107 ntBASIC16.88■□□□□ 0.29
Vsx1Q91V10 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC16.88■□□□□ 0.29
Vsx1Q91V10 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC16.88■□□□□ 0.29
Vsx1Q91V10 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vsx1Q91V10 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vsx1Q91V10 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vsx1Q91V10 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC16.88■□□□□ 0.29
Vsx1Q91V10 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
Vsx1Q91V10 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Vsx1Q91V10 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vsx1Q91V10 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vsx1Q91V10 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vsx1Q91V10 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vsx1Q91V10 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Vsx1Q91V10 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vsx1Q91V10 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vsx1Q91V10 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC16.87■□□□□ 0.29
Vsx1Q91V10 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC16.87■□□□□ 0.29
Vsx1Q91V10 Gm37025-201ENSMUST00000195159 829 ntBASIC16.87■□□□□ 0.29
Vsx1Q91V10 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Vsx1Q91V10 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vsx1Q91V10 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vsx1Q91V10 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Vsx1Q91V10 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Vsx1Q91V10 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vsx1Q91V10 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vsx1Q91V10 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Vsx1Q91V10 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vsx1Q91V10 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vsx1Q91V10 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vsx1Q91V10 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC16.86■□□□□ 0.29
Vsx1Q91V10 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vsx1Q91V10 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Vsx1Q91V10 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Vsx1Q91V10 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC16.86■□□□□ 0.29
Vsx1Q91V10 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC16.86■□□□□ 0.29
Vsx1Q91V10 Gm43347-201ENSMUST00000200226 580 ntBASIC16.86■□□□□ 0.29
Vsx1Q91V10 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Vsx1Q91V10 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vsx1Q91V10 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vsx1Q91V10 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vsx1Q91V10 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vsx1Q91V10 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vsx1Q91V10 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms