Protein–RNA interactions for Protein: Q8VDS4

Rprd1a, Regulation of nuclear pre-mRNA domain-containing protein 1A, mousemouse

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rprd1aQ8VDS4 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rprd1aQ8VDS4 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rprd1aQ8VDS4 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
Rprd1aQ8VDS4 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rprd1aQ8VDS4 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Rprd1aQ8VDS4 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Rprd1aQ8VDS4 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rprd1aQ8VDS4 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Rprd1aQ8VDS4 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Rprd1aQ8VDS4 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rprd1aQ8VDS4 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rprd1aQ8VDS4 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rprd1aQ8VDS4 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Rprd1aQ8VDS4 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rprd1aQ8VDS4 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC17.59■□□□□ 0.41
Rprd1aQ8VDS4 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rprd1aQ8VDS4 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rprd1aQ8VDS4 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC17.59■□□□□ 0.41
Rprd1aQ8VDS4 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
Rprd1aQ8VDS4 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rprd1aQ8VDS4 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rprd1aQ8VDS4 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rprd1aQ8VDS4 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Rprd1aQ8VDS4 AC158538.1-201ENSMUST00000225870 294 ntBASIC17.59■□□□□ 0.41
Rprd1aQ8VDS4 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rprd1aQ8VDS4 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rprd1aQ8VDS4 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rprd1aQ8VDS4 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rprd1aQ8VDS4 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rprd1aQ8VDS4 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rprd1aQ8VDS4 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rprd1aQ8VDS4 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Rprd1aQ8VDS4 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Rprd1aQ8VDS4 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Rprd1aQ8VDS4 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rprd1aQ8VDS4 Gm4217-201ENSMUST00000182243 1002 ntBASIC17.58■□□□□ 0.4
Rprd1aQ8VDS4 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rprd1aQ8VDS4 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rprd1aQ8VDS4 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Rprd1aQ8VDS4 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rprd1aQ8VDS4 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rprd1aQ8VDS4 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.58■□□□□ 0.4
Rprd1aQ8VDS4 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC17.58■□□□□ 0.4
Rprd1aQ8VDS4 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rprd1aQ8VDS4 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rprd1aQ8VDS4 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rprd1aQ8VDS4 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rprd1aQ8VDS4 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rprd1aQ8VDS4 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rprd1aQ8VDS4 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rprd1aQ8VDS4 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rprd1aQ8VDS4 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rprd1aQ8VDS4 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rprd1aQ8VDS4 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rprd1aQ8VDS4 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.57■□□□□ 0.4
Rprd1aQ8VDS4 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rprd1aQ8VDS4 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rprd1aQ8VDS4 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Rprd1aQ8VDS4 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Rprd1aQ8VDS4 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC17.57■□□□□ 0.4
Rprd1aQ8VDS4 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC17.57■□□□□ 0.4
Rprd1aQ8VDS4 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rprd1aQ8VDS4 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Rprd1aQ8VDS4 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rprd1aQ8VDS4 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Rprd1aQ8VDS4 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rprd1aQ8VDS4 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rprd1aQ8VDS4 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Rprd1aQ8VDS4 Gm5421-201ENSMUST00000181698 2354 ntBASIC17.57■□□□□ 0.4
Rprd1aQ8VDS4 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rprd1aQ8VDS4 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rprd1aQ8VDS4 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Rprd1aQ8VDS4 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rprd1aQ8VDS4 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rprd1aQ8VDS4 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Rprd1aQ8VDS4 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rprd1aQ8VDS4 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC17.56■□□□□ 0.4
Rprd1aQ8VDS4 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC17.56■□□□□ 0.4
Rprd1aQ8VDS4 Gm18959-201ENSMUST00000208954 655 ntBASIC17.56■□□□□ 0.4
Rprd1aQ8VDS4 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC17.56■□□□□ 0.4
Rprd1aQ8VDS4 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rprd1aQ8VDS4 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rprd1aQ8VDS4 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rprd1aQ8VDS4 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
Rprd1aQ8VDS4 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Rprd1aQ8VDS4 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
Rprd1aQ8VDS4 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Rprd1aQ8VDS4 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Rprd1aQ8VDS4 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Rprd1aQ8VDS4 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
Rprd1aQ8VDS4 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rprd1aQ8VDS4 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rprd1aQ8VDS4 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rprd1aQ8VDS4 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rprd1aQ8VDS4 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
Rprd1aQ8VDS4 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
Rprd1aQ8VDS4 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Rprd1aQ8VDS4 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Rprd1aQ8VDS4 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
Rprd1aQ8VDS4 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC17.55■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms