Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC18.78■□□□□ 0.6
Rpap2Q8VC34 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rpap2Q8VC34 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rpap2Q8VC34 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rpap2Q8VC34 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC18.78■□□□□ 0.6
Rpap2Q8VC34 Gm19439-201ENSMUST00000198195 2273 ntBASIC18.77■□□□□ 0.6
Rpap2Q8VC34 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rpap2Q8VC34 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rpap2Q8VC34 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rpap2Q8VC34 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rpap2Q8VC34 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC18.77■□□□□ 0.6
Rpap2Q8VC34 Gm10252-201ENSMUST00000209541 832 ntBASIC18.77■□□□□ 0.6
Rpap2Q8VC34 Gm30025-201ENSMUST00000218555 728 ntBASIC18.77■□□□□ 0.6
Rpap2Q8VC34 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Rpap2Q8VC34 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rpap2Q8VC34 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rpap2Q8VC34 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Rpap2Q8VC34 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rpap2Q8VC34 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rpap2Q8VC34 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
Rpap2Q8VC34 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
Rpap2Q8VC34 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC18.77■□□□□ 0.59
Rpap2Q8VC34 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Rpap2Q8VC34 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Rpap2Q8VC34 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rpap2Q8VC34 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rpap2Q8VC34 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Rpap2Q8VC34 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rpap2Q8VC34 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC18.76■□□□□ 0.59
Rpap2Q8VC34 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Rpap2Q8VC34 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rpap2Q8VC34 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Rpap2Q8VC34 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Rpap2Q8VC34 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rpap2Q8VC34 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC18.76■□□□□ 0.59
Rpap2Q8VC34 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rpap2Q8VC34 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Rpap2Q8VC34 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rpap2Q8VC34 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Rpap2Q8VC34 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Rpap2Q8VC34 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC18.76■□□□□ 0.59
Rpap2Q8VC34 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rpap2Q8VC34 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Rpap2Q8VC34 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Rpap2Q8VC34 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rpap2Q8VC34 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rpap2Q8VC34 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Rpap2Q8VC34 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Rpap2Q8VC34 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC18.75■□□□□ 0.59
Rpap2Q8VC34 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rpap2Q8VC34 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Rpap2Q8VC34 Gm11620-201ENSMUST00000118770 1845 ntBASIC18.75■□□□□ 0.59
Rpap2Q8VC34 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rpap2Q8VC34 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC18.75■□□□□ 0.59
Rpap2Q8VC34 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rpap2Q8VC34 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Rpap2Q8VC34 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rpap2Q8VC34 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC18.75■□□□□ 0.59
Rpap2Q8VC34 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rpap2Q8VC34 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rpap2Q8VC34 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rpap2Q8VC34 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rpap2Q8VC34 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rpap2Q8VC34 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rpap2Q8VC34 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rpap2Q8VC34 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Rpap2Q8VC34 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Rpap2Q8VC34 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rpap2Q8VC34 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rpap2Q8VC34 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Rpap2Q8VC34 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Rpap2Q8VC34 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
Rpap2Q8VC34 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Rpap2Q8VC34 Gm20472-201ENSMUST00000174403 1240 ntBASIC18.74■□□□□ 0.59
Rpap2Q8VC34 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rpap2Q8VC34 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Rpap2Q8VC34 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rpap2Q8VC34 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rpap2Q8VC34 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rpap2Q8VC34 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Rpap2Q8VC34 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Rpap2Q8VC34 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rpap2Q8VC34 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rpap2Q8VC34 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rpap2Q8VC34 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Rpap2Q8VC34 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC18.73■□□□□ 0.59
Rpap2Q8VC34 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC18.73■□□□□ 0.59
Rpap2Q8VC34 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rpap2Q8VC34 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Rpap2Q8VC34 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC18.73■□□□□ 0.59
Rpap2Q8VC34 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rpap2Q8VC34 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Rpap2Q8VC34 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC18.73■□□□□ 0.59
Rpap2Q8VC34 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC18.73■□□□□ 0.59
Rpap2Q8VC34 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC18.73■□□□□ 0.59
Rpap2Q8VC34 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rpap2Q8VC34 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rpap2Q8VC34 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Rpap2Q8VC34 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Rpap2Q8VC34 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC18.73■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms