Protein–RNA interactions for Protein: Q8R550

Sh3kbp1, SH3 domain-containing kinase-binding protein 1, mousemouse

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3kbp1Q8R550 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sh3kbp1Q8R550 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sh3kbp1Q8R550 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sh3kbp1Q8R550 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sh3kbp1Q8R550 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sh3kbp1Q8R550 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sh3kbp1Q8R550 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sh3kbp1Q8R550 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sh3kbp1Q8R550 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sh3kbp1Q8R550 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sh3kbp1Q8R550 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC17.64■□□□□ 0.41
Sh3kbp1Q8R550 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sh3kbp1Q8R550 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Sh3kbp1Q8R550 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sh3kbp1Q8R550 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Sh3kbp1Q8R550 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC17.64■□□□□ 0.41
Sh3kbp1Q8R550 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC17.64■□□□□ 0.41
Sh3kbp1Q8R550 Mir8112-201ENSMUST00000184382 131 ntBASIC17.64■□□□□ 0.41
Sh3kbp1Q8R550 Gm43353-201ENSMUST00000199224 1295 ntBASIC17.64■□□□□ 0.41
Sh3kbp1Q8R550 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sh3kbp1Q8R550 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sh3kbp1Q8R550 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Sh3kbp1Q8R550 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sh3kbp1Q8R550 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sh3kbp1Q8R550 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Sh3kbp1Q8R550 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Sh3kbp1Q8R550 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sh3kbp1Q8R550 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.63■□□□□ 0.41
Sh3kbp1Q8R550 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sh3kbp1Q8R550 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sh3kbp1Q8R550 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sh3kbp1Q8R550 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Sh3kbp1Q8R550 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sh3kbp1Q8R550 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sh3kbp1Q8R550 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sh3kbp1Q8R550 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Sh3kbp1Q8R550 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Sh3kbp1Q8R550 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sh3kbp1Q8R550 Gm27463-201ENSMUST00000183569 57 ntBASIC17.63■□□□□ 0.41
Sh3kbp1Q8R550 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
Sh3kbp1Q8R550 Gm21362-201ENSMUST00000194272 928 ntBASIC17.63■□□□□ 0.41
Sh3kbp1Q8R550 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC17.63■□□□□ 0.41
Sh3kbp1Q8R550 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sh3kbp1Q8R550 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sh3kbp1Q8R550 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sh3kbp1Q8R550 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Sh3kbp1Q8R550 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Sh3kbp1Q8R550 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Sh3kbp1Q8R550 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sh3kbp1Q8R550 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sh3kbp1Q8R550 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Sh3kbp1Q8R550 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Sh3kbp1Q8R550 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC17.62■□□□□ 0.41
Sh3kbp1Q8R550 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC17.62■□□□□ 0.41
Sh3kbp1Q8R550 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC17.62■□□□□ 0.41
Sh3kbp1Q8R550 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Sh3kbp1Q8R550 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC17.62■□□□□ 0.41
Sh3kbp1Q8R550 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Sh3kbp1Q8R550 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Sh3kbp1Q8R550 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC17.62■□□□□ 0.41
Sh3kbp1Q8R550 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Sh3kbp1Q8R550 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sh3kbp1Q8R550 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Sh3kbp1Q8R550 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC17.62■□□□□ 0.41
Sh3kbp1Q8R550 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sh3kbp1Q8R550 Gm37194-201ENSMUST00000193092 3031 ntBASIC17.62■□□□□ 0.41
Sh3kbp1Q8R550 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.62■□□□□ 0.41
Sh3kbp1Q8R550 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sh3kbp1Q8R550 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sh3kbp1Q8R550 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sh3kbp1Q8R550 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sh3kbp1Q8R550 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.61■□□□□ 0.41
Sh3kbp1Q8R550 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sh3kbp1Q8R550 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sh3kbp1Q8R550 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sh3kbp1Q8R550 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC17.61■□□□□ 0.41
Sh3kbp1Q8R550 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sh3kbp1Q8R550 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC17.61■□□□□ 0.41
Sh3kbp1Q8R550 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Sh3kbp1Q8R550 Gm8969-201ENSMUST00000199694 526 ntBASIC17.61■□□□□ 0.41
Sh3kbp1Q8R550 Gm45058-201ENSMUST00000205810 766 ntBASIC17.61■□□□□ 0.41
Sh3kbp1Q8R550 Gm4974-201ENSMUST00000209974 875 ntBASIC17.61■□□□□ 0.41
Sh3kbp1Q8R550 Gm10819-201ENSMUST00000099988 561 ntBASIC17.61■□□□□ 0.41
Sh3kbp1Q8R550 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sh3kbp1Q8R550 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sh3kbp1Q8R550 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.61■□□□□ 0.41
Sh3kbp1Q8R550 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sh3kbp1Q8R550 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Sh3kbp1Q8R550 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Sh3kbp1Q8R550 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Sh3kbp1Q8R550 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sh3kbp1Q8R550 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sh3kbp1Q8R550 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sh3kbp1Q8R550 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC17.6■□□□□ 0.41
Sh3kbp1Q8R550 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Sh3kbp1Q8R550 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sh3kbp1Q8R550 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sh3kbp1Q8R550 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sh3kbp1Q8R550 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Sh3kbp1Q8R550 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms