Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nup35Q8R4R6 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nup35Q8R4R6 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nup35Q8R4R6 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
Nup35Q8R4R6 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Nup35Q8R4R6 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC13.98□□□□□ -0.17
Nup35Q8R4R6 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nup35Q8R4R6 Flg-201ENSMUST00000050758 1488 ntBASIC13.98□□□□□ -0.17
Nup35Q8R4R6 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nup35Q8R4R6 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC13.98□□□□□ -0.17
Nup35Q8R4R6 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nup35Q8R4R6 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nup35Q8R4R6 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Nup35Q8R4R6 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nup35Q8R4R6 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nup35Q8R4R6 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nup35Q8R4R6 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Nup35Q8R4R6 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nup35Q8R4R6 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nup35Q8R4R6 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nup35Q8R4R6 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC13.97□□□□□ -0.17
Nup35Q8R4R6 Gm36858-201ENSMUST00000194501 2391 ntBASIC13.97□□□□□ -0.17
Nup35Q8R4R6 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nup35Q8R4R6 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nup35Q8R4R6 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Nup35Q8R4R6 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nup35Q8R4R6 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nup35Q8R4R6 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nup35Q8R4R6 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Nup35Q8R4R6 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nup35Q8R4R6 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC13.97□□□□□ -0.17
Nup35Q8R4R6 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC13.97□□□□□ -0.17
Nup35Q8R4R6 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC13.97□□□□□ -0.17
Nup35Q8R4R6 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nup35Q8R4R6 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Nup35Q8R4R6 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nup35Q8R4R6 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nup35Q8R4R6 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nup35Q8R4R6 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nup35Q8R4R6 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nup35Q8R4R6 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC13.97□□□□□ -0.17
Nup35Q8R4R6 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nup35Q8R4R6 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Nup35Q8R4R6 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nup35Q8R4R6 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Nup35Q8R4R6 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nup35Q8R4R6 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Nup35Q8R4R6 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nup35Q8R4R6 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Nup35Q8R4R6 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nup35Q8R4R6 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nup35Q8R4R6 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nup35Q8R4R6 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nup35Q8R4R6 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC13.96□□□□□ -0.17
Nup35Q8R4R6 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Nup35Q8R4R6 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC13.96□□□□□ -0.17
Nup35Q8R4R6 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nup35Q8R4R6 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nup35Q8R4R6 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nup35Q8R4R6 Gm6365-201ENSMUST00000054711 744 ntBASIC13.96□□□□□ -0.17
Nup35Q8R4R6 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nup35Q8R4R6 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nup35Q8R4R6 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nup35Q8R4R6 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Nup35Q8R4R6 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Nup35Q8R4R6 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.18
Nup35Q8R4R6 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nup35Q8R4R6 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nup35Q8R4R6 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nup35Q8R4R6 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Nup35Q8R4R6 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Nup35Q8R4R6 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC13.95□□□□□ -0.18
Nup35Q8R4R6 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Nup35Q8R4R6 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nup35Q8R4R6 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nup35Q8R4R6 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nup35Q8R4R6 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Nup35Q8R4R6 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nup35Q8R4R6 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC13.95□□□□□ -0.18
Nup35Q8R4R6 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
Nup35Q8R4R6 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC13.95□□□□□ -0.18
Nup35Q8R4R6 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC13.95□□□□□ -0.18
Nup35Q8R4R6 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nup35Q8R4R6 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC13.95□□□□□ -0.18
Nup35Q8R4R6 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Nup35Q8R4R6 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Nup35Q8R4R6 Gm29241-201ENSMUST00000189260 1096 ntBASIC13.95□□□□□ -0.18
Nup35Q8R4R6 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC13.95□□□□□ -0.18
Nup35Q8R4R6 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC13.95□□□□□ -0.18
Nup35Q8R4R6 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC13.95□□□□□ -0.18
Nup35Q8R4R6 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC13.95□□□□□ -0.18
Nup35Q8R4R6 Gm44549-201ENSMUST00000208351 577 ntBASIC13.95□□□□□ -0.18
Nup35Q8R4R6 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nup35Q8R4R6 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Nup35Q8R4R6 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nup35Q8R4R6 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Nup35Q8R4R6 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Nup35Q8R4R6 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Nup35Q8R4R6 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nup35Q8R4R6 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms