Protein–RNA interactions for Protein: Q8R422

Cd109, CD109 antigen, mousemouse

Predictions only

Length 1,442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd109Q8R422 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Cd109Q8R422 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Cd109Q8R422 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC24.26■■□□□ 1.47
Cd109Q8R422 AC153889.1-201ENSMUST00000219257 330 ntBASIC24.26■■□□□ 1.47
Cd109Q8R422 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC24.26■■□□□ 1.47
Cd109Q8R422 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Cd109Q8R422 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Cd109Q8R422 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
Cd109Q8R422 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Cd109Q8R422 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Cd109Q8R422 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
Cd109Q8R422 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC24.25■■□□□ 1.47
Cd109Q8R422 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Cd109Q8R422 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Cd109Q8R422 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Cd109Q8R422 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC24.25■■□□□ 1.47
Cd109Q8R422 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Cd109Q8R422 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC24.25■■□□□ 1.47
Cd109Q8R422 Gm12895-201ENSMUST00000122214 226 ntBASIC24.25■■□□□ 1.47
Cd109Q8R422 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC24.25■■□□□ 1.47
Cd109Q8R422 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Cd109Q8R422 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC24.25■■□□□ 1.47
Cd109Q8R422 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Cd109Q8R422 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Cd109Q8R422 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC24.24■■□□□ 1.47
Cd109Q8R422 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Cd109Q8R422 Tfap2a-209ENSMUST00000225180 1828 ntBASIC24.24■■□□□ 1.47
Cd109Q8R422 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Cd109Q8R422 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC24.24■■□□□ 1.47
Cd109Q8R422 Gm29707-201ENSMUST00000196325 491 ntBASIC24.24■■□□□ 1.47
Cd109Q8R422 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC24.24■■□□□ 1.47
Cd109Q8R422 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Cd109Q8R422 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Cd109Q8R422 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC24.24■■□□□ 1.47
Cd109Q8R422 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Cd109Q8R422 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC24.23■■□□□ 1.47
Cd109Q8R422 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC24.23■■□□□ 1.47
Cd109Q8R422 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC24.23■■□□□ 1.47
Cd109Q8R422 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Cd109Q8R422 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC24.23■■□□□ 1.47
Cd109Q8R422 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Cd109Q8R422 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Cd109Q8R422 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Cd109Q8R422 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Cd109Q8R422 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Cd109Q8R422 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Cd109Q8R422 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC24.22■■□□□ 1.47
Cd109Q8R422 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Cd109Q8R422 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC24.22■■□□□ 1.47
Cd109Q8R422 Gm27459-201ENSMUST00000184860 107 ntBASIC24.22■■□□□ 1.47
Cd109Q8R422 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC24.22■■□□□ 1.47
Cd109Q8R422 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC24.22■■□□□ 1.47
Cd109Q8R422 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC24.22■■□□□ 1.47
Cd109Q8R422 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC24.21■■□□□ 1.47
Cd109Q8R422 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Cd109Q8R422 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC24.21■■□□□ 1.47
Cd109Q8R422 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC24.21■■□□□ 1.47
Cd109Q8R422 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Cd109Q8R422 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC24.21■■□□□ 1.47
Cd109Q8R422 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC24.21■■□□□ 1.47
Cd109Q8R422 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Cd109Q8R422 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Cd109Q8R422 Gm5112-201ENSMUST00000204407 2368 ntBASIC24.2■■□□□ 1.47
Cd109Q8R422 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
Cd109Q8R422 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC24.2■■□□□ 1.46
Cd109Q8R422 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC24.2■■□□□ 1.46
Cd109Q8R422 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.46
Cd109Q8R422 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Cd109Q8R422 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Cd109Q8R422 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Cd109Q8R422 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
Cd109Q8R422 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Cd109Q8R422 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC24.2■■□□□ 1.46
Cd109Q8R422 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.46
Cd109Q8R422 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Cd109Q8R422 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Cd109Q8R422 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Cd109Q8R422 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Cd109Q8R422 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC24.19■■□□□ 1.46
Cd109Q8R422 Gm44771-201ENSMUST00000206975 626 ntBASIC24.19■■□□□ 1.46
Cd109Q8R422 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Cd109Q8R422 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC24.19■■□□□ 1.46
Cd109Q8R422 AL590614.2-201ENSMUST00000225374 1937 ntBASIC24.19■■□□□ 1.46
Cd109Q8R422 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC24.19■■□□□ 1.46
Cd109Q8R422 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC24.18■■□□□ 1.46
Cd109Q8R422 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC24.18■■□□□ 1.46
Cd109Q8R422 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Cd109Q8R422 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
Cd109Q8R422 Gm8969-201ENSMUST00000199694 526 ntBASIC24.18■■□□□ 1.46
Cd109Q8R422 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC24.18■■□□□ 1.46
Cd109Q8R422 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
Cd109Q8R422 AC164629.2-201ENSMUST00000217916 270 ntBASIC24.18■■□□□ 1.46
Cd109Q8R422 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Cd109Q8R422 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
Cd109Q8R422 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC24.18■■□□□ 1.46
Cd109Q8R422 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
Cd109Q8R422 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Cd109Q8R422 Dmtn-207ENSMUST00000228001 2437 ntBASIC24.18■■□□□ 1.46
Cd109Q8R422 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Cd109Q8R422 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms