Protein–RNA interactions for Protein: Q8R323

Rfc3, Replication factor C subunit 3, mousemouse

Known RBP Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc3Q8R323 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rfc3Q8R323 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rfc3Q8R323 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Rfc3Q8R323 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Rfc3Q8R323 Gm27463-201ENSMUST00000183569 57 ntBASIC15.79■□□□□ 0.12
Rfc3Q8R323 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rfc3Q8R323 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
Rfc3Q8R323 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rfc3Q8R323 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
Rfc3Q8R323 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Rfc3Q8R323 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rfc3Q8R323 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rfc3Q8R323 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Rfc3Q8R323 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rfc3Q8R323 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
Rfc3Q8R323 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rfc3Q8R323 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Rfc3Q8R323 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rfc3Q8R323 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rfc3Q8R323 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rfc3Q8R323 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rfc3Q8R323 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC15.78■□□□□ 0.12
Rfc3Q8R323 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rfc3Q8R323 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Rfc3Q8R323 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC15.78■□□□□ 0.12
Rfc3Q8R323 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
Rfc3Q8R323 Gm43353-201ENSMUST00000199224 1295 ntBASIC15.78■□□□□ 0.12
Rfc3Q8R323 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC15.78■□□□□ 0.12
Rfc3Q8R323 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC15.78■□□□□ 0.12
Rfc3Q8R323 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rfc3Q8R323 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Rfc3Q8R323 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rfc3Q8R323 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
Rfc3Q8R323 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rfc3Q8R323 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC15.78■□□□□ 0.12
Rfc3Q8R323 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rfc3Q8R323 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rfc3Q8R323 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Rfc3Q8R323 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rfc3Q8R323 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rfc3Q8R323 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rfc3Q8R323 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rfc3Q8R323 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rfc3Q8R323 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rfc3Q8R323 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC15.78■□□□□ 0.12
Rfc3Q8R323 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
Rfc3Q8R323 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rfc3Q8R323 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rfc3Q8R323 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rfc3Q8R323 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rfc3Q8R323 Fcho2-208ENSMUST00000224992 2964 ntBASIC15.77■□□□□ 0.12
Rfc3Q8R323 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rfc3Q8R323 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rfc3Q8R323 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rfc3Q8R323 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Rfc3Q8R323 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC15.77■□□□□ 0.12
Rfc3Q8R323 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Rfc3Q8R323 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Rfc3Q8R323 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Rfc3Q8R323 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rfc3Q8R323 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Rfc3Q8R323 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Rfc3Q8R323 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Rfc3Q8R323 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Rfc3Q8R323 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Rfc3Q8R323 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
Rfc3Q8R323 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC15.77■□□□□ 0.11
Rfc3Q8R323 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Rfc3Q8R323 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
Rfc3Q8R323 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rfc3Q8R323 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC15.76■□□□□ 0.11
Rfc3Q8R323 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rfc3Q8R323 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rfc3Q8R323 Gm10418-201ENSMUST00000100943 576 ntBASIC15.76■□□□□ 0.11
Rfc3Q8R323 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC15.76■□□□□ 0.11
Rfc3Q8R323 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC15.76■□□□□ 0.11
Rfc3Q8R323 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Rfc3Q8R323 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC15.76■□□□□ 0.11
Rfc3Q8R323 Gm18959-201ENSMUST00000208954 655 ntBASIC15.76■□□□□ 0.11
Rfc3Q8R323 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC15.76■□□□□ 0.11
Rfc3Q8R323 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rfc3Q8R323 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rfc3Q8R323 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rfc3Q8R323 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Rfc3Q8R323 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rfc3Q8R323 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rfc3Q8R323 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rfc3Q8R323 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC15.76■□□□□ 0.11
Rfc3Q8R323 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rfc3Q8R323 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rfc3Q8R323 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Rfc3Q8R323 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC15.76■□□□□ 0.11
Rfc3Q8R323 Gm5828-201ENSMUST00000071842 1860 ntBASIC15.76■□□□□ 0.11
Rfc3Q8R323 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rfc3Q8R323 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rfc3Q8R323 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Rfc3Q8R323 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rfc3Q8R323 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
Rfc3Q8R323 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rfc3Q8R323 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC15.75■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms