Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Trim29Q8R2Q0 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Trim29Q8R2Q0 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Trim29Q8R2Q0 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
Trim29Q8R2Q0 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Trim29Q8R2Q0 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim29Q8R2Q0 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC19.55■□□□□ 0.72
Trim29Q8R2Q0 AC153881.1-201ENSMUST00000214448 284 ntBASIC19.55■□□□□ 0.72
Trim29Q8R2Q0 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim29Q8R2Q0 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim29Q8R2Q0 Gm7712-202ENSMUST00000222331 1510 ntBASIC19.55■□□□□ 0.72
Trim29Q8R2Q0 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC19.55■□□□□ 0.72
Trim29Q8R2Q0 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Trim29Q8R2Q0 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim29Q8R2Q0 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Trim29Q8R2Q0 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim29Q8R2Q0 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC19.54■□□□□ 0.72
Trim29Q8R2Q0 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Trim29Q8R2Q0 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim29Q8R2Q0 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim29Q8R2Q0 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim29Q8R2Q0 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Trim29Q8R2Q0 Gm37025-201ENSMUST00000195159 829 ntBASIC19.54■□□□□ 0.72
Trim29Q8R2Q0 AC175538.1-201ENSMUST00000225343 1269 ntBASIC19.54■□□□□ 0.72
Trim29Q8R2Q0 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim29Q8R2Q0 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim29Q8R2Q0 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Trim29Q8R2Q0 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC19.54■□□□□ 0.72
Trim29Q8R2Q0 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Trim29Q8R2Q0 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim29Q8R2Q0 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Trim29Q8R2Q0 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim29Q8R2Q0 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Trim29Q8R2Q0 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim29Q8R2Q0 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim29Q8R2Q0 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Trim29Q8R2Q0 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC19.53■□□□□ 0.72
Trim29Q8R2Q0 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Trim29Q8R2Q0 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Trim29Q8R2Q0 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim29Q8R2Q0 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
Trim29Q8R2Q0 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Trim29Q8R2Q0 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC19.53■□□□□ 0.72
Trim29Q8R2Q0 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim29Q8R2Q0 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim29Q8R2Q0 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Trim29Q8R2Q0 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim29Q8R2Q0 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trim29Q8R2Q0 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Trim29Q8R2Q0 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trim29Q8R2Q0 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC19.52■□□□□ 0.72
Trim29Q8R2Q0 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trim29Q8R2Q0 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trim29Q8R2Q0 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trim29Q8R2Q0 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trim29Q8R2Q0 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Trim29Q8R2Q0 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Trim29Q8R2Q0 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Trim29Q8R2Q0 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC19.52■□□□□ 0.72
Trim29Q8R2Q0 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Trim29Q8R2Q0 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Trim29Q8R2Q0 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Trim29Q8R2Q0 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC19.52■□□□□ 0.71
Trim29Q8R2Q0 Gm43338-201ENSMUST00000198617 2223 ntBASIC19.52■□□□□ 0.71
Trim29Q8R2Q0 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
Trim29Q8R2Q0 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
Trim29Q8R2Q0 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim29Q8R2Q0 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim29Q8R2Q0 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC19.51■□□□□ 0.71
Trim29Q8R2Q0 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Trim29Q8R2Q0 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC19.51■□□□□ 0.71
Trim29Q8R2Q0 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim29Q8R2Q0 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim29Q8R2Q0 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim29Q8R2Q0 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Trim29Q8R2Q0 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim29Q8R2Q0 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Trim29Q8R2Q0 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Trim29Q8R2Q0 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trim29Q8R2Q0 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trim29Q8R2Q0 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Trim29Q8R2Q0 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC19.5■□□□□ 0.71
Trim29Q8R2Q0 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Trim29Q8R2Q0 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC19.5■□□□□ 0.71
Trim29Q8R2Q0 Arhgef33-211ENSMUST00000225658 473 ntBASIC19.5■□□□□ 0.71
Trim29Q8R2Q0 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trim29Q8R2Q0 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Trim29Q8R2Q0 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trim29Q8R2Q0 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trim29Q8R2Q0 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Trim29Q8R2Q0 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trim29Q8R2Q0 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Trim29Q8R2Q0 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim29Q8R2Q0 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim29Q8R2Q0 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim29Q8R2Q0 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC19.49■□□□□ 0.71
Trim29Q8R2Q0 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim29Q8R2Q0 Gm12085-201ENSMUST00000119263 940 ntBASIC19.49■□□□□ 0.71
Trim29Q8R2Q0 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC19.49■□□□□ 0.71
Trim29Q8R2Q0 Timm23-208ENSMUST00000226683 750 ntBASIC19.49■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms