Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC17.13■□□□□ 0.33
Nudcd3Q8R1N4 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Nudcd3Q8R1N4 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nudcd3Q8R1N4 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nudcd3Q8R1N4 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nudcd3Q8R1N4 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nudcd3Q8R1N4 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nudcd3Q8R1N4 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nudcd3Q8R1N4 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
Nudcd3Q8R1N4 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nudcd3Q8R1N4 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nudcd3Q8R1N4 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nudcd3Q8R1N4 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nudcd3Q8R1N4 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Nudcd3Q8R1N4 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Nudcd3Q8R1N4 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC17.13■□□□□ 0.33
Nudcd3Q8R1N4 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Nudcd3Q8R1N4 Gm13401-201ENSMUST00000117074 291 ntBASIC17.13■□□□□ 0.33
Nudcd3Q8R1N4 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nudcd3Q8R1N4 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC17.13■□□□□ 0.33
Nudcd3Q8R1N4 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC17.13■□□□□ 0.33
Nudcd3Q8R1N4 Wnt10b-205ENSMUST00000226846 1204 ntBASIC17.13■□□□□ 0.33
Nudcd3Q8R1N4 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Nudcd3Q8R1N4 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Nudcd3Q8R1N4 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Nudcd3Q8R1N4 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nudcd3Q8R1N4 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Nudcd3Q8R1N4 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Nudcd3Q8R1N4 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Nudcd3Q8R1N4 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Nudcd3Q8R1N4 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nudcd3Q8R1N4 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nudcd3Q8R1N4 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nudcd3Q8R1N4 Flg-201ENSMUST00000050758 1488 ntBASIC17.12■□□□□ 0.33
Nudcd3Q8R1N4 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Nudcd3Q8R1N4 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nudcd3Q8R1N4 Gm11620-201ENSMUST00000118770 1845 ntBASIC17.12■□□□□ 0.33
Nudcd3Q8R1N4 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nudcd3Q8R1N4 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nudcd3Q8R1N4 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nudcd3Q8R1N4 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC17.12■□□□□ 0.33
Nudcd3Q8R1N4 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nudcd3Q8R1N4 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Nudcd3Q8R1N4 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Nudcd3Q8R1N4 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nudcd3Q8R1N4 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nudcd3Q8R1N4 Mir2861-201ENSMUST00000175539 82 ntBASIC17.12■□□□□ 0.33
Nudcd3Q8R1N4 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC17.12■□□□□ 0.33
Nudcd3Q8R1N4 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nudcd3Q8R1N4 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nudcd3Q8R1N4 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nudcd3Q8R1N4 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nudcd3Q8R1N4 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nudcd3Q8R1N4 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Nudcd3Q8R1N4 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Nudcd3Q8R1N4 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nudcd3Q8R1N4 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nudcd3Q8R1N4 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nudcd3Q8R1N4 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nudcd3Q8R1N4 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nudcd3Q8R1N4 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nudcd3Q8R1N4 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC17.11■□□□□ 0.33
Nudcd3Q8R1N4 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nudcd3Q8R1N4 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Nudcd3Q8R1N4 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nudcd3Q8R1N4 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nudcd3Q8R1N4 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nudcd3Q8R1N4 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nudcd3Q8R1N4 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nudcd3Q8R1N4 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nudcd3Q8R1N4 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Nudcd3Q8R1N4 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nudcd3Q8R1N4 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nudcd3Q8R1N4 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Nudcd3Q8R1N4 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nudcd3Q8R1N4 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nudcd3Q8R1N4 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nudcd3Q8R1N4 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nudcd3Q8R1N4 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nudcd3Q8R1N4 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nudcd3Q8R1N4 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Nudcd3Q8R1N4 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC17.1■□□□□ 0.33
Nudcd3Q8R1N4 Gm44549-201ENSMUST00000208351 577 ntBASIC17.1■□□□□ 0.33
Nudcd3Q8R1N4 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Nudcd3Q8R1N4 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Nudcd3Q8R1N4 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nudcd3Q8R1N4 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nudcd3Q8R1N4 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Nudcd3Q8R1N4 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nudcd3Q8R1N4 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Nudcd3Q8R1N4 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Nudcd3Q8R1N4 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Nudcd3Q8R1N4 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Nudcd3Q8R1N4 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nudcd3Q8R1N4 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nudcd3Q8R1N4 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nudcd3Q8R1N4 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Nudcd3Q8R1N4 AV356131-201ENSMUST00000206201 750 ntBASIC17.09■□□□□ 0.33
Nudcd3Q8R1N4 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC17.09■□□□□ 0.33
Nudcd3Q8R1N4 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms