Protein–RNA interactions for Protein: Q8R1J1

Tm6sf2, Transmembrane 6 superfamily member 2, mousemouse

Predictions only

Length 378 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tm6sf2Q8R1J1 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Tm6sf2Q8R1J1 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Tm6sf2Q8R1J1 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Tm6sf2Q8R1J1 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Tm6sf2Q8R1J1 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC16.08■□□□□ 0.16
Tm6sf2Q8R1J1 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Tm6sf2Q8R1J1 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Tm6sf2Q8R1J1 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Tm6sf2Q8R1J1 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Tm6sf2Q8R1J1 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Tm6sf2Q8R1J1 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Tm6sf2Q8R1J1 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Tm6sf2Q8R1J1 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Tm6sf2Q8R1J1 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Tm6sf2Q8R1J1 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Tm6sf2Q8R1J1 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Tm6sf2Q8R1J1 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Tm6sf2Q8R1J1 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Tm6sf2Q8R1J1 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Tm6sf2Q8R1J1 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Tm6sf2Q8R1J1 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Tm6sf2Q8R1J1 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Tm6sf2Q8R1J1 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC16.07■□□□□ 0.16
Tm6sf2Q8R1J1 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Tm6sf2Q8R1J1 Gm16061-201ENSMUST00000122167 857 ntBASIC16.07■□□□□ 0.16
Tm6sf2Q8R1J1 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC16.07■□□□□ 0.16
Tm6sf2Q8R1J1 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC16.07■□□□□ 0.16
Tm6sf2Q8R1J1 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC16.07■□□□□ 0.16
Tm6sf2Q8R1J1 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Tm6sf2Q8R1J1 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Tm6sf2Q8R1J1 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Tm6sf2Q8R1J1 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Tm6sf2Q8R1J1 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Tm6sf2Q8R1J1 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Tm6sf2Q8R1J1 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Tm6sf2Q8R1J1 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Tm6sf2Q8R1J1 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Tm6sf2Q8R1J1 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
Tm6sf2Q8R1J1 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Tm6sf2Q8R1J1 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Tm6sf2Q8R1J1 Gm18958-201ENSMUST00000174258 762 ntBASIC16.06■□□□□ 0.16
Tm6sf2Q8R1J1 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC16.06■□□□□ 0.16
Tm6sf2Q8R1J1 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC16.06■□□□□ 0.16
Tm6sf2Q8R1J1 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
Tm6sf2Q8R1J1 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Tm6sf2Q8R1J1 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Tm6sf2Q8R1J1 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Tm6sf2Q8R1J1 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
Tm6sf2Q8R1J1 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Tm6sf2Q8R1J1 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Tm6sf2Q8R1J1 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Tm6sf2Q8R1J1 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
Tm6sf2Q8R1J1 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Tm6sf2Q8R1J1 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Tm6sf2Q8R1J1 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Tm6sf2Q8R1J1 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Tm6sf2Q8R1J1 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Tm6sf2Q8R1J1 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Tm6sf2Q8R1J1 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Tm6sf2Q8R1J1 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Tm6sf2Q8R1J1 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Tm6sf2Q8R1J1 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Tm6sf2Q8R1J1 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Tm6sf2Q8R1J1 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC16.05■□□□□ 0.16
Tm6sf2Q8R1J1 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Tm6sf2Q8R1J1 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Tm6sf2Q8R1J1 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Tm6sf2Q8R1J1 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Tm6sf2Q8R1J1 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Tm6sf2Q8R1J1 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Tm6sf2Q8R1J1 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Tm6sf2Q8R1J1 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Tm6sf2Q8R1J1 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Tm6sf2Q8R1J1 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Tm6sf2Q8R1J1 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Tm6sf2Q8R1J1 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Tm6sf2Q8R1J1 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Tm6sf2Q8R1J1 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Tm6sf2Q8R1J1 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC16.04■□□□□ 0.16
Tm6sf2Q8R1J1 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Tm6sf2Q8R1J1 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC16.04■□□□□ 0.16
Tm6sf2Q8R1J1 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC16.04■□□□□ 0.16
Tm6sf2Q8R1J1 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Tm6sf2Q8R1J1 Gm7370-201ENSMUST00000219471 767 ntBASIC16.04■□□□□ 0.16
Tm6sf2Q8R1J1 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Tm6sf2Q8R1J1 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Tm6sf2Q8R1J1 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
Tm6sf2Q8R1J1 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Tm6sf2Q8R1J1 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Tm6sf2Q8R1J1 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Tm6sf2Q8R1J1 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Tm6sf2Q8R1J1 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Tm6sf2Q8R1J1 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Tm6sf2Q8R1J1 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC16.04■□□□□ 0.16
Tm6sf2Q8R1J1 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC16.04■□□□□ 0.16
Tm6sf2Q8R1J1 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Tm6sf2Q8R1J1 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Tm6sf2Q8R1J1 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Tm6sf2Q8R1J1 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC16.03■□□□□ 0.16
Tm6sf2Q8R1J1 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms