Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Clrn1Q8K445 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Clrn1Q8K445 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Clrn1Q8K445 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Clrn1Q8K445 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Clrn1Q8K445 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Clrn1Q8K445 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Clrn1Q8K445 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Clrn1Q8K445 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Clrn1Q8K445 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Clrn1Q8K445 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Clrn1Q8K445 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC16.15■□□□□ 0.18
Clrn1Q8K445 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC16.15■□□□□ 0.18
Clrn1Q8K445 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Clrn1Q8K445 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Clrn1Q8K445 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Clrn1Q8K445 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Clrn1Q8K445 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Clrn1Q8K445 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Clrn1Q8K445 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Clrn1Q8K445 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Clrn1Q8K445 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Clrn1Q8K445 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Clrn1Q8K445 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Clrn1Q8K445 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Clrn1Q8K445 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Clrn1Q8K445 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Clrn1Q8K445 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Clrn1Q8K445 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Clrn1Q8K445 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Clrn1Q8K445 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Clrn1Q8K445 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC16.14■□□□□ 0.17
Clrn1Q8K445 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
Clrn1Q8K445 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC16.14■□□□□ 0.17
Clrn1Q8K445 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC16.14■□□□□ 0.17
Clrn1Q8K445 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Clrn1Q8K445 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Clrn1Q8K445 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Clrn1Q8K445 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Clrn1Q8K445 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Clrn1Q8K445 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Clrn1Q8K445 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Clrn1Q8K445 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Clrn1Q8K445 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Clrn1Q8K445 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Clrn1Q8K445 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC16.13■□□□□ 0.17
Clrn1Q8K445 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Clrn1Q8K445 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Clrn1Q8K445 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Clrn1Q8K445 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Clrn1Q8K445 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Clrn1Q8K445 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Clrn1Q8K445 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Clrn1Q8K445 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC16.13■□□□□ 0.17
Clrn1Q8K445 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Clrn1Q8K445 Gm37025-201ENSMUST00000195159 829 ntBASIC16.13■□□□□ 0.17
Clrn1Q8K445 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Clrn1Q8K445 Otx2os1-204ENSMUST00000227221 751 ntBASIC16.13■□□□□ 0.17
Clrn1Q8K445 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Clrn1Q8K445 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Clrn1Q8K445 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Clrn1Q8K445 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Clrn1Q8K445 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
Clrn1Q8K445 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Clrn1Q8K445 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Clrn1Q8K445 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Clrn1Q8K445 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Clrn1Q8K445 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Clrn1Q8K445 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Clrn1Q8K445 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Clrn1Q8K445 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Clrn1Q8K445 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Clrn1Q8K445 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Clrn1Q8K445 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Clrn1Q8K445 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC16.12■□□□□ 0.17
Clrn1Q8K445 Gm38027-201ENSMUST00000192315 235 ntBASIC16.12■□□□□ 0.17
Clrn1Q8K445 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Clrn1Q8K445 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Clrn1Q8K445 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Clrn1Q8K445 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Clrn1Q8K445 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Clrn1Q8K445 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Clrn1Q8K445 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Clrn1Q8K445 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Clrn1Q8K445 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Clrn1Q8K445 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Clrn1Q8K445 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Clrn1Q8K445 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Clrn1Q8K445 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
Clrn1Q8K445 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC16.11■□□□□ 0.17
Clrn1Q8K445 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Clrn1Q8K445 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Clrn1Q8K445 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Clrn1Q8K445 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC16.11■□□□□ 0.17
Clrn1Q8K445 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC16.11■□□□□ 0.17
Clrn1Q8K445 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC16.11■□□□□ 0.17
Clrn1Q8K445 Mir5122-201ENSMUST00000175004 89 ntBASIC16.11■□□□□ 0.17
Clrn1Q8K445 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC16.11■□□□□ 0.17
Clrn1Q8K445 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
Clrn1Q8K445 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC16.11■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 75.6 ms