Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cchcr1Q8K2I2 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cchcr1Q8K2I2 Gm44878-201ENSMUST00000205812 1295 ntBASIC20.24■□□□□ 0.83
Cchcr1Q8K2I2 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC20.24■□□□□ 0.83
Cchcr1Q8K2I2 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cchcr1Q8K2I2 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cchcr1Q8K2I2 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cchcr1Q8K2I2 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Cchcr1Q8K2I2 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC20.24■□□□□ 0.83
Cchcr1Q8K2I2 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Cchcr1Q8K2I2 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cchcr1Q8K2I2 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Cchcr1Q8K2I2 AC124581.1-201ENSMUST00000225416 1399 ntBASIC20.23■□□□□ 0.83
Cchcr1Q8K2I2 Gm11841-201ENSMUST00000117060 1963 ntBASIC20.23■□□□□ 0.83
Cchcr1Q8K2I2 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cchcr1Q8K2I2 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Cchcr1Q8K2I2 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cchcr1Q8K2I2 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC20.23■□□□□ 0.83
Cchcr1Q8K2I2 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cchcr1Q8K2I2 Gm9694-201ENSMUST00000193347 1189 ntBASIC20.23■□□□□ 0.83
Cchcr1Q8K2I2 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cchcr1Q8K2I2 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Cchcr1Q8K2I2 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cchcr1Q8K2I2 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cchcr1Q8K2I2 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cchcr1Q8K2I2 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Cchcr1Q8K2I2 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cchcr1Q8K2I2 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cchcr1Q8K2I2 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cchcr1Q8K2I2 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cchcr1Q8K2I2 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Cchcr1Q8K2I2 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC20.22■□□□□ 0.83
Cchcr1Q8K2I2 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Cchcr1Q8K2I2 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cchcr1Q8K2I2 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cchcr1Q8K2I2 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC20.22■□□□□ 0.83
Cchcr1Q8K2I2 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cchcr1Q8K2I2 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cchcr1Q8K2I2 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC20.22■□□□□ 0.83
Cchcr1Q8K2I2 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cchcr1Q8K2I2 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cchcr1Q8K2I2 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cchcr1Q8K2I2 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cchcr1Q8K2I2 Gm5643-201ENSMUST00000117081 966 ntBASIC20.21■□□□□ 0.83
Cchcr1Q8K2I2 Gm15378-201ENSMUST00000121894 207 ntBASIC20.21■□□□□ 0.83
Cchcr1Q8K2I2 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Cchcr1Q8K2I2 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Cchcr1Q8K2I2 AC135637.1-201ENSMUST00000227750 365 ntBASIC20.21■□□□□ 0.83
Cchcr1Q8K2I2 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cchcr1Q8K2I2 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cchcr1Q8K2I2 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Cchcr1Q8K2I2 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC20.21■□□□□ 0.83
Cchcr1Q8K2I2 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cchcr1Q8K2I2 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cchcr1Q8K2I2 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Cchcr1Q8K2I2 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cchcr1Q8K2I2 CT010444.2-201ENSMUST00000217877 1629 ntBASIC20.2■□□□□ 0.82
Cchcr1Q8K2I2 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cchcr1Q8K2I2 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cchcr1Q8K2I2 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Cchcr1Q8K2I2 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Cchcr1Q8K2I2 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cchcr1Q8K2I2 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC20.2■□□□□ 0.82
Cchcr1Q8K2I2 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cchcr1Q8K2I2 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Cchcr1Q8K2I2 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cchcr1Q8K2I2 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cchcr1Q8K2I2 Gm15743-202ENSMUST00000182690 1901 ntBASIC20.19■□□□□ 0.82
Cchcr1Q8K2I2 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cchcr1Q8K2I2 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cchcr1Q8K2I2 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cchcr1Q8K2I2 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cchcr1Q8K2I2 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Cchcr1Q8K2I2 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC20.19■□□□□ 0.82
Cchcr1Q8K2I2 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Cchcr1Q8K2I2 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cchcr1Q8K2I2 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Cchcr1Q8K2I2 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
Cchcr1Q8K2I2 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cchcr1Q8K2I2 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC20.19■□□□□ 0.82
Cchcr1Q8K2I2 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cchcr1Q8K2I2 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Cchcr1Q8K2I2 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cchcr1Q8K2I2 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Cchcr1Q8K2I2 Gm37025-201ENSMUST00000195159 829 ntBASIC20.18■□□□□ 0.82
Cchcr1Q8K2I2 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cchcr1Q8K2I2 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cchcr1Q8K2I2 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cchcr1Q8K2I2 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cchcr1Q8K2I2 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC20.17■□□□□ 0.82
Cchcr1Q8K2I2 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC20.17■□□□□ 0.82
Cchcr1Q8K2I2 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cchcr1Q8K2I2 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC20.17■□□□□ 0.82
Cchcr1Q8K2I2 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
Cchcr1Q8K2I2 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cchcr1Q8K2I2 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cchcr1Q8K2I2 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC20.17■□□□□ 0.82
Cchcr1Q8K2I2 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Cchcr1Q8K2I2 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Cchcr1Q8K2I2 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms