Protein–RNA interactions for Protein: Q8JZK6

Trim61, MCG22896, isoform CRA_b, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim61Q8JZK6 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC17.96■□□□□ 0.47
Trim61Q8JZK6 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim61Q8JZK6 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Trim61Q8JZK6 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.96■□□□□ 0.47
Trim61Q8JZK6 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17.96■□□□□ 0.46
Trim61Q8JZK6 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.46
Trim61Q8JZK6 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
Trim61Q8JZK6 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Trim61Q8JZK6 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim61Q8JZK6 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim61Q8JZK6 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC17.95■□□□□ 0.46
Trim61Q8JZK6 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim61Q8JZK6 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim61Q8JZK6 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trim61Q8JZK6 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
Trim61Q8JZK6 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC17.95■□□□□ 0.46
Trim61Q8JZK6 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Trim61Q8JZK6 Gm3272-201ENSMUST00000181181 1229 ntBASIC17.95■□□□□ 0.46
Trim61Q8JZK6 Mir8112-201ENSMUST00000184382 131 ntBASIC17.95■□□□□ 0.46
Trim61Q8JZK6 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim61Q8JZK6 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim61Q8JZK6 Gm10566-201ENSMUST00000086739 996 ntBASIC17.95■□□□□ 0.46
Trim61Q8JZK6 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim61Q8JZK6 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC17.95■□□□□ 0.46
Trim61Q8JZK6 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
Trim61Q8JZK6 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim61Q8JZK6 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Trim61Q8JZK6 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trim61Q8JZK6 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim61Q8JZK6 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim61Q8JZK6 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim61Q8JZK6 Gm14464-201ENSMUST00000119658 1254 ntBASIC17.94■□□□□ 0.46
Trim61Q8JZK6 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trim61Q8JZK6 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Trim61Q8JZK6 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim61Q8JZK6 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim61Q8JZK6 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trim61Q8JZK6 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Trim61Q8JZK6 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim61Q8JZK6 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Trim61Q8JZK6 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trim61Q8JZK6 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim61Q8JZK6 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim61Q8JZK6 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim61Q8JZK6 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim61Q8JZK6 Gm43272-201ENSMUST00000200599 1584 ntBASIC17.93■□□□□ 0.46
Trim61Q8JZK6 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.93■□□□□ 0.46
Trim61Q8JZK6 Gm11950-201ENSMUST00000121615 838 ntBASIC17.93■□□□□ 0.46
Trim61Q8JZK6 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC17.93■□□□□ 0.46
Trim61Q8JZK6 Gm17807-201ENSMUST00000186869 298 ntBASIC17.93■□□□□ 0.46
Trim61Q8JZK6 Gm17971-201ENSMUST00000190239 806 ntBASIC17.93■□□□□ 0.46
Trim61Q8JZK6 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
Trim61Q8JZK6 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Trim61Q8JZK6 AC130713.1-201ENSMUST00000228853 1096 ntBASIC17.93■□□□□ 0.46
Trim61Q8JZK6 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim61Q8JZK6 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim61Q8JZK6 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC17.93■□□□□ 0.46
Trim61Q8JZK6 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim61Q8JZK6 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim61Q8JZK6 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Trim61Q8JZK6 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim61Q8JZK6 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Trim61Q8JZK6 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Trim61Q8JZK6 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Trim61Q8JZK6 Actl10-202ENSMUST00000226583 1501 ntBASIC17.93■□□□□ 0.46
Trim61Q8JZK6 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Trim61Q8JZK6 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Trim61Q8JZK6 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim61Q8JZK6 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim61Q8JZK6 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim61Q8JZK6 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim61Q8JZK6 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim61Q8JZK6 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim61Q8JZK6 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Trim61Q8JZK6 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Trim61Q8JZK6 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Trim61Q8JZK6 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC17.92■□□□□ 0.46
Trim61Q8JZK6 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Trim61Q8JZK6 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim61Q8JZK6 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Trim61Q8JZK6 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Trim61Q8JZK6 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim61Q8JZK6 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Trim61Q8JZK6 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
Trim61Q8JZK6 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim61Q8JZK6 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
Trim61Q8JZK6 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim61Q8JZK6 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim61Q8JZK6 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim61Q8JZK6 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Trim61Q8JZK6 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim61Q8JZK6 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
Trim61Q8JZK6 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trim61Q8JZK6 Gm18958-201ENSMUST00000174258 762 ntBASIC17.91■□□□□ 0.46
Trim61Q8JZK6 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trim61Q8JZK6 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim61Q8JZK6 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC17.91■□□□□ 0.46
Trim61Q8JZK6 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim61Q8JZK6 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim61Q8JZK6 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms