Protein–RNA interactions for Protein: Q8CG50

Rab43, Ras-related protein Rab-43, mousemouse

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab43Q8CG50 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rab43Q8CG50 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Rab43Q8CG50 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC16.68■□□□□ 0.26
Rab43Q8CG50 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rab43Q8CG50 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rab43Q8CG50 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rab43Q8CG50 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rab43Q8CG50 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
Rab43Q8CG50 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rab43Q8CG50 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Rab43Q8CG50 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rab43Q8CG50 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rab43Q8CG50 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Rab43Q8CG50 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rab43Q8CG50 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC16.67■□□□□ 0.26
Rab43Q8CG50 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rab43Q8CG50 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rab43Q8CG50 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rab43Q8CG50 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC16.67■□□□□ 0.26
Rab43Q8CG50 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rab43Q8CG50 Mir3081-201ENSMUST00000175305 84 ntBASIC16.67■□□□□ 0.26
Rab43Q8CG50 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC16.67■□□□□ 0.26
Rab43Q8CG50 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Rab43Q8CG50 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rab43Q8CG50 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rab43Q8CG50 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Rab43Q8CG50 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rab43Q8CG50 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rab43Q8CG50 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Rab43Q8CG50 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rab43Q8CG50 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rab43Q8CG50 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
Rab43Q8CG50 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rab43Q8CG50 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC16.66■□□□□ 0.26
Rab43Q8CG50 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rab43Q8CG50 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rab43Q8CG50 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rab43Q8CG50 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rab43Q8CG50 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Rab43Q8CG50 Gm45328-201ENSMUST00000210942 917 ntBASIC16.66■□□□□ 0.26
Rab43Q8CG50 Gm5953-201ENSMUST00000220644 2616 ntBASIC16.66■□□□□ 0.26
Rab43Q8CG50 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rab43Q8CG50 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Rab43Q8CG50 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC16.66■□□□□ 0.26
Rab43Q8CG50 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rab43Q8CG50 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rab43Q8CG50 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rab43Q8CG50 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rab43Q8CG50 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rab43Q8CG50 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rab43Q8CG50 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rab43Q8CG50 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rab43Q8CG50 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rab43Q8CG50 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rab43Q8CG50 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rab43Q8CG50 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rab43Q8CG50 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC16.65■□□□□ 0.26
Rab43Q8CG50 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Rab43Q8CG50 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rab43Q8CG50 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rab43Q8CG50 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rab43Q8CG50 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rab43Q8CG50 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rab43Q8CG50 Gm27742-201ENSMUST00000184667 60 ntBASIC16.65■□□□□ 0.26
Rab43Q8CG50 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rab43Q8CG50 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC16.65■□□□□ 0.26
Rab43Q8CG50 Otx2os1-206ENSMUST00000228153 787 ntBASIC16.65■□□□□ 0.26
Rab43Q8CG50 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Rab43Q8CG50 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rab43Q8CG50 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rab43Q8CG50 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Rab43Q8CG50 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
Rab43Q8CG50 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rab43Q8CG50 Cxcl14-202ENSMUST00000224801 1467 ntBASIC16.65■□□□□ 0.26
Rab43Q8CG50 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rab43Q8CG50 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC16.65■□□□□ 0.26
Rab43Q8CG50 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rab43Q8CG50 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rab43Q8CG50 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC16.65■□□□□ 0.26
Rab43Q8CG50 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rab43Q8CG50 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rab43Q8CG50 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.26
Rab43Q8CG50 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rab43Q8CG50 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Rab43Q8CG50 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rab43Q8CG50 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rab43Q8CG50 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rab43Q8CG50 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rab43Q8CG50 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rab43Q8CG50 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rab43Q8CG50 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Rab43Q8CG50 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rab43Q8CG50 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Rab43Q8CG50 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Rab43Q8CG50 Gm7153-201ENSMUST00000117092 455 ntBASIC16.64■□□□□ 0.25
Rab43Q8CG50 Gm27357-201ENSMUST00000183754 135 ntBASIC16.64■□□□□ 0.25
Rab43Q8CG50 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rab43Q8CG50 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rab43Q8CG50 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rab43Q8CG50 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms