Protein–RNA interactions for Protein: Q8CG47

Smc4, Structural maintenance of chromosomes protein 4, mousemouse

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc4Q8CG47 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Smc4Q8CG47 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Smc4Q8CG47 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Smc4Q8CG47 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Smc4Q8CG47 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC21.1■□□□□ 0.97
Smc4Q8CG47 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Smc4Q8CG47 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Smc4Q8CG47 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Smc4Q8CG47 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Smc4Q8CG47 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Smc4Q8CG47 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Smc4Q8CG47 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Smc4Q8CG47 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Smc4Q8CG47 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Smc4Q8CG47 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Smc4Q8CG47 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Smc4Q8CG47 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
Smc4Q8CG47 Fam105a-203ENSMUST00000226170 3043 ntBASIC21.09■□□□□ 0.97
Smc4Q8CG47 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC21.09■□□□□ 0.97
Smc4Q8CG47 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Smc4Q8CG47 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Smc4Q8CG47 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Smc4Q8CG47 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Smc4Q8CG47 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Smc4Q8CG47 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Smc4Q8CG47 Dmtn-207ENSMUST00000228001 2437 ntBASIC21.09■□□□□ 0.97
Smc4Q8CG47 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Smc4Q8CG47 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Smc4Q8CG47 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Smc4Q8CG47 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Smc4Q8CG47 Actl10-202ENSMUST00000226583 1501 ntBASIC21.09■□□□□ 0.97
Smc4Q8CG47 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Smc4Q8CG47 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Smc4Q8CG47 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Smc4Q8CG47 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC21.08■□□□□ 0.97
Smc4Q8CG47 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Smc4Q8CG47 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Smc4Q8CG47 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Smc4Q8CG47 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC21.08■□□□□ 0.97
Smc4Q8CG47 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Smc4Q8CG47 Gm5587-201ENSMUST00000206270 674 ntBASIC21.08■□□□□ 0.97
Smc4Q8CG47 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Smc4Q8CG47 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Smc4Q8CG47 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC21.08■□□□□ 0.97
Smc4Q8CG47 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Smc4Q8CG47 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC21.08■□□□□ 0.96
Smc4Q8CG47 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Smc4Q8CG47 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
Smc4Q8CG47 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.96
Smc4Q8CG47 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
Smc4Q8CG47 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Smc4Q8CG47 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Smc4Q8CG47 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Smc4Q8CG47 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Smc4Q8CG47 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Smc4Q8CG47 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Smc4Q8CG47 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Smc4Q8CG47 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC21.07■□□□□ 0.96
Smc4Q8CG47 Gm21362-201ENSMUST00000194272 928 ntBASIC21.07■□□□□ 0.96
Smc4Q8CG47 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Smc4Q8CG47 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Smc4Q8CG47 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Smc4Q8CG47 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Smc4Q8CG47 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Smc4Q8CG47 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Smc4Q8CG47 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Smc4Q8CG47 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Smc4Q8CG47 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC21.06■□□□□ 0.96
Smc4Q8CG47 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Smc4Q8CG47 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Smc4Q8CG47 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Smc4Q8CG47 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Smc4Q8CG47 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Smc4Q8CG47 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Smc4Q8CG47 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC21.06■□□□□ 0.96
Smc4Q8CG47 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Smc4Q8CG47 Gm8258-201ENSMUST00000055593 1449 ntBASIC21.05■□□□□ 0.96
Smc4Q8CG47 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Smc4Q8CG47 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Smc4Q8CG47 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC21.05■□□□□ 0.96
Smc4Q8CG47 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC21.05■□□□□ 0.96
Smc4Q8CG47 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC21.05■□□□□ 0.96
Smc4Q8CG47 Gm33142-201ENSMUST00000193913 867 ntBASIC21.05■□□□□ 0.96
Smc4Q8CG47 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC21.05■□□□□ 0.96
Smc4Q8CG47 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Smc4Q8CG47 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Smc4Q8CG47 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Smc4Q8CG47 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Smc4Q8CG47 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Smc4Q8CG47 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC21.05■□□□□ 0.96
Smc4Q8CG47 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Smc4Q8CG47 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Smc4Q8CG47 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC21.05■□□□□ 0.96
Smc4Q8CG47 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Smc4Q8CG47 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC21.04■□□□□ 0.96
Smc4Q8CG47 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Smc4Q8CG47 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Smc4Q8CG47 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Smc4Q8CG47 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Smc4Q8CG47 Gm37194-201ENSMUST00000193092 3031 ntBASIC21.04■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms