Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Ccdc28aQ8CEI3 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Ccdc28aQ8CEI3 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC18.07■□□□□ 0.48
Ccdc28aQ8CEI3 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC18.07■□□□□ 0.48
Ccdc28aQ8CEI3 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ccdc28aQ8CEI3 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC18.07■□□□□ 0.48
Ccdc28aQ8CEI3 Gm42569-201ENSMUST00000200539 472 ntBASIC18.07■□□□□ 0.48
Ccdc28aQ8CEI3 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC18.07■□□□□ 0.48
Ccdc28aQ8CEI3 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC18.07■□□□□ 0.48
Ccdc28aQ8CEI3 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ccdc28aQ8CEI3 Gm10138-203ENSMUST00000206952 366 ntBASIC18.07■□□□□ 0.48
Ccdc28aQ8CEI3 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Ccdc28aQ8CEI3 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ccdc28aQ8CEI3 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ccdc28aQ8CEI3 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Ccdc28aQ8CEI3 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ccdc28aQ8CEI3 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ccdc28aQ8CEI3 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ccdc28aQ8CEI3 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ccdc28aQ8CEI3 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Ccdc28aQ8CEI3 Gm8839-201ENSMUST00000121279 1645 ntBASIC18.06■□□□□ 0.48
Ccdc28aQ8CEI3 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ccdc28aQ8CEI3 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ccdc28aQ8CEI3 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ccdc28aQ8CEI3 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC18.06■□□□□ 0.48
Ccdc28aQ8CEI3 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Ccdc28aQ8CEI3 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC18.06■□□□□ 0.48
Ccdc28aQ8CEI3 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC18.06■□□□□ 0.48
Ccdc28aQ8CEI3 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Ccdc28aQ8CEI3 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC18.06■□□□□ 0.48
Ccdc28aQ8CEI3 Mir5133-201ENSMUST00000174955 77 ntBASIC18.06■□□□□ 0.48
Ccdc28aQ8CEI3 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ccdc28aQ8CEI3 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ccdc28aQ8CEI3 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ccdc28aQ8CEI3 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ccdc28aQ8CEI3 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ccdc28aQ8CEI3 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Ccdc28aQ8CEI3 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ccdc28aQ8CEI3 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ccdc28aQ8CEI3 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ccdc28aQ8CEI3 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ccdc28aQ8CEI3 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ccdc28aQ8CEI3 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Ccdc28aQ8CEI3 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ccdc28aQ8CEI3 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Ccdc28aQ8CEI3 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ccdc28aQ8CEI3 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ccdc28aQ8CEI3 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ccdc28aQ8CEI3 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ccdc28aQ8CEI3 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ccdc28aQ8CEI3 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ccdc28aQ8CEI3 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC18.05■□□□□ 0.48
Ccdc28aQ8CEI3 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ccdc28aQ8CEI3 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Ccdc28aQ8CEI3 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Ccdc28aQ8CEI3 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ccdc28aQ8CEI3 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ccdc28aQ8CEI3 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ccdc28aQ8CEI3 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ccdc28aQ8CEI3 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ccdc28aQ8CEI3 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ccdc28aQ8CEI3 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ccdc28aQ8CEI3 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ccdc28aQ8CEI3 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ccdc28aQ8CEI3 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ccdc28aQ8CEI3 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ccdc28aQ8CEI3 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ccdc28aQ8CEI3 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ccdc28aQ8CEI3 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ccdc28aQ8CEI3 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Ccdc28aQ8CEI3 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC18.04■□□□□ 0.48
Ccdc28aQ8CEI3 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC18.04■□□□□ 0.48
Ccdc28aQ8CEI3 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
Ccdc28aQ8CEI3 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ccdc28aQ8CEI3 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ccdc28aQ8CEI3 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC18.04■□□□□ 0.48
Ccdc28aQ8CEI3 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ccdc28aQ8CEI3 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ccdc28aQ8CEI3 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ccdc28aQ8CEI3 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ccdc28aQ8CEI3 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ccdc28aQ8CEI3 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ccdc28aQ8CEI3 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Ccdc28aQ8CEI3 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Ccdc28aQ8CEI3 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ccdc28aQ8CEI3 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Ccdc28aQ8CEI3 Gm6576-201ENSMUST00000169678 883 ntBASIC18.03■□□□□ 0.48
Ccdc28aQ8CEI3 Gm18284-201ENSMUST00000172604 624 ntBASIC18.03■□□□□ 0.48
Ccdc28aQ8CEI3 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC18.03■□□□□ 0.48
Ccdc28aQ8CEI3 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ccdc28aQ8CEI3 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ccdc28aQ8CEI3 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ccdc28aQ8CEI3 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ccdc28aQ8CEI3 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ccdc28aQ8CEI3 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ccdc28aQ8CEI3 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ccdc28aQ8CEI3 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ccdc28aQ8CEI3 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ccdc28aQ8CEI3 Gm26596-201ENSMUST00000180464 2655 ntBASIC18.03■□□□□ 0.48
Ccdc28aQ8CEI3 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms