Protein–RNA interactions for Protein: Q8CCF0

Prpf31, U4/U6 small nuclear ribonucleoprotein Prp31, mousemouse

Known RBP Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf31Q8CCF0 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Prpf31Q8CCF0 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Prpf31Q8CCF0 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Prpf31Q8CCF0 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Prpf31Q8CCF0 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Prpf31Q8CCF0 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Prpf31Q8CCF0 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Prpf31Q8CCF0 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC18.7■□□□□ 0.58
Prpf31Q8CCF0 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Prpf31Q8CCF0 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Prpf31Q8CCF0 Mir1668-201ENSMUST00000184114 107 ntBASIC18.7■□□□□ 0.58
Prpf31Q8CCF0 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Prpf31Q8CCF0 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Prpf31Q8CCF0 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Prpf31Q8CCF0 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Prpf31Q8CCF0 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Prpf31Q8CCF0 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Prpf31Q8CCF0 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC18.7■□□□□ 0.58
Prpf31Q8CCF0 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Prpf31Q8CCF0 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Prpf31Q8CCF0 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Prpf31Q8CCF0 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Prpf31Q8CCF0 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Prpf31Q8CCF0 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Prpf31Q8CCF0 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Prpf31Q8CCF0 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Prpf31Q8CCF0 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Prpf31Q8CCF0 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Prpf31Q8CCF0 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC18.69■□□□□ 0.58
Prpf31Q8CCF0 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
Prpf31Q8CCF0 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC18.69■□□□□ 0.58
Prpf31Q8CCF0 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC18.69■□□□□ 0.58
Prpf31Q8CCF0 Gm21559-201ENSMUST00000220638 855 ntBASIC18.69■□□□□ 0.58
Prpf31Q8CCF0 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Prpf31Q8CCF0 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Prpf31Q8CCF0 Gm8587-201ENSMUST00000076538 843 ntBASIC18.69■□□□□ 0.58
Prpf31Q8CCF0 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.69■□□□□ 0.58
Prpf31Q8CCF0 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Prpf31Q8CCF0 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Prpf31Q8CCF0 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Prpf31Q8CCF0 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC18.69■□□□□ 0.58
Prpf31Q8CCF0 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Prpf31Q8CCF0 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Prpf31Q8CCF0 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Prpf31Q8CCF0 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Prpf31Q8CCF0 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
Prpf31Q8CCF0 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Prpf31Q8CCF0 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Prpf31Q8CCF0 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Prpf31Q8CCF0 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Prpf31Q8CCF0 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Prpf31Q8CCF0 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC18.68■□□□□ 0.58
Prpf31Q8CCF0 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Prpf31Q8CCF0 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Prpf31Q8CCF0 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC18.68■□□□□ 0.58
Prpf31Q8CCF0 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Prpf31Q8CCF0 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Prpf31Q8CCF0 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC18.68■□□□□ 0.58
Prpf31Q8CCF0 Gm6728-201ENSMUST00000178117 1065 ntBASIC18.68■□□□□ 0.58
Prpf31Q8CCF0 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC18.68■□□□□ 0.58
Prpf31Q8CCF0 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Prpf31Q8CCF0 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Prpf31Q8CCF0 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Prpf31Q8CCF0 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
Prpf31Q8CCF0 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Prpf31Q8CCF0 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Prpf31Q8CCF0 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Prpf31Q8CCF0 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Prpf31Q8CCF0 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Prpf31Q8CCF0 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Prpf31Q8CCF0 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Prpf31Q8CCF0 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Prpf31Q8CCF0 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Prpf31Q8CCF0 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC18.67■□□□□ 0.58
Prpf31Q8CCF0 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Prpf31Q8CCF0 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Prpf31Q8CCF0 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Prpf31Q8CCF0 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Prpf31Q8CCF0 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC18.67■□□□□ 0.58
Prpf31Q8CCF0 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Prpf31Q8CCF0 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Prpf31Q8CCF0 Gm27389-201ENSMUST00000183622 195 ntBASIC18.67■□□□□ 0.58
Prpf31Q8CCF0 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Prpf31Q8CCF0 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC18.67■□□□□ 0.58
Prpf31Q8CCF0 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Prpf31Q8CCF0 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC18.67■□□□□ 0.58
Prpf31Q8CCF0 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Prpf31Q8CCF0 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Prpf31Q8CCF0 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Prpf31Q8CCF0 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Prpf31Q8CCF0 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Prpf31Q8CCF0 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC18.66■□□□□ 0.58
Prpf31Q8CCF0 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Prpf31Q8CCF0 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Prpf31Q8CCF0 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Prpf31Q8CCF0 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC18.66■□□□□ 0.58
Prpf31Q8CCF0 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Prpf31Q8CCF0 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Prpf31Q8CCF0 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC18.66■□□□□ 0.58
Prpf31Q8CCF0 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms