Protein–RNA interactions for Protein: Q8CA03

Slc46a2, Thymic stromal cotransporter protein, mousemouse

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc46a2Q8CA03 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Slc46a2Q8CA03 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Slc46a2Q8CA03 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Slc46a2Q8CA03 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Slc46a2Q8CA03 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC16.44■□□□□ 0.22
Slc46a2Q8CA03 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Slc46a2Q8CA03 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Slc46a2Q8CA03 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Slc46a2Q8CA03 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Slc46a2Q8CA03 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Slc46a2Q8CA03 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
Slc46a2Q8CA03 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Slc46a2Q8CA03 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Slc46a2Q8CA03 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Slc46a2Q8CA03 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
Slc46a2Q8CA03 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Slc46a2Q8CA03 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Slc46a2Q8CA03 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC16.44■□□□□ 0.22
Slc46a2Q8CA03 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Slc46a2Q8CA03 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Slc46a2Q8CA03 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Slc46a2Q8CA03 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Slc46a2Q8CA03 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Slc46a2Q8CA03 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Slc46a2Q8CA03 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Slc46a2Q8CA03 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Slc46a2Q8CA03 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Slc46a2Q8CA03 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Slc46a2Q8CA03 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Slc46a2Q8CA03 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Slc46a2Q8CA03 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC16.43■□□□□ 0.22
Slc46a2Q8CA03 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Slc46a2Q8CA03 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Slc46a2Q8CA03 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Slc46a2Q8CA03 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Slc46a2Q8CA03 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Slc46a2Q8CA03 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC16.43■□□□□ 0.22
Slc46a2Q8CA03 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Slc46a2Q8CA03 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Slc46a2Q8CA03 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Slc46a2Q8CA03 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Slc46a2Q8CA03 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Slc46a2Q8CA03 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Slc46a2Q8CA03 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Slc46a2Q8CA03 Gm7290-201ENSMUST00000104990 617 ntBASIC16.42■□□□□ 0.22
Slc46a2Q8CA03 Gm12918-201ENSMUST00000120234 636 ntBASIC16.42■□□□□ 0.22
Slc46a2Q8CA03 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
Slc46a2Q8CA03 Gm15710-201ENSMUST00000121821 636 ntBASIC16.42■□□□□ 0.22
Slc46a2Q8CA03 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Slc46a2Q8CA03 Gm5075-201ENSMUST00000196916 622 ntBASIC16.42■□□□□ 0.22
Slc46a2Q8CA03 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Slc46a2Q8CA03 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC16.42■□□□□ 0.22
Slc46a2Q8CA03 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC16.42■□□□□ 0.22
Slc46a2Q8CA03 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Slc46a2Q8CA03 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Slc46a2Q8CA03 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Slc46a2Q8CA03 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Slc46a2Q8CA03 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
Slc46a2Q8CA03 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Slc46a2Q8CA03 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Slc46a2Q8CA03 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Slc46a2Q8CA03 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC16.42■□□□□ 0.22
Slc46a2Q8CA03 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Slc46a2Q8CA03 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Slc46a2Q8CA03 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Slc46a2Q8CA03 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC16.41■□□□□ 0.22
Slc46a2Q8CA03 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Slc46a2Q8CA03 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Slc46a2Q8CA03 Gm10654-201ENSMUST00000098653 1633 ntBASIC16.41■□□□□ 0.22
Slc46a2Q8CA03 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Slc46a2Q8CA03 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Slc46a2Q8CA03 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Slc46a2Q8CA03 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC16.41■□□□□ 0.22
Slc46a2Q8CA03 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Slc46a2Q8CA03 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Slc46a2Q8CA03 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Slc46a2Q8CA03 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Slc46a2Q8CA03 Gm11927-201ENSMUST00000118472 759 ntBASIC16.41■□□□□ 0.22
Slc46a2Q8CA03 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC16.41■□□□□ 0.22
Slc46a2Q8CA03 Gm6211-202ENSMUST00000167849 925 ntBASIC16.41■□□□□ 0.22
Slc46a2Q8CA03 Mir6349-201ENSMUST00000184059 97 ntBASIC16.41■□□□□ 0.22
Slc46a2Q8CA03 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Slc46a2Q8CA03 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Slc46a2Q8CA03 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Slc46a2Q8CA03 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Slc46a2Q8CA03 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Slc46a2Q8CA03 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC16.41■□□□□ 0.22
Slc46a2Q8CA03 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Slc46a2Q8CA03 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Slc46a2Q8CA03 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Slc46a2Q8CA03 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Slc46a2Q8CA03 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Slc46a2Q8CA03 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Slc46a2Q8CA03 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Slc46a2Q8CA03 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Slc46a2Q8CA03 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Slc46a2Q8CA03 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Slc46a2Q8CA03 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Slc46a2Q8CA03 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Slc46a2Q8CA03 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms