Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sh3rf2Q8BZT2 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sh3rf2Q8BZT2 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sh3rf2Q8BZT2 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sh3rf2Q8BZT2 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.35■□□□□ 0.37
Sh3rf2Q8BZT2 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC17.35■□□□□ 0.37
Sh3rf2Q8BZT2 Gm27704-201ENSMUST00000185094 107 ntBASIC17.35■□□□□ 0.37
Sh3rf2Q8BZT2 Ank2-226ENSMUST00000189368 339 ntBASIC17.35■□□□□ 0.37
Sh3rf2Q8BZT2 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC17.35■□□□□ 0.37
Sh3rf2Q8BZT2 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Sh3rf2Q8BZT2 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sh3rf2Q8BZT2 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Sh3rf2Q8BZT2 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sh3rf2Q8BZT2 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sh3rf2Q8BZT2 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Sh3rf2Q8BZT2 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Sh3rf2Q8BZT2 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Sh3rf2Q8BZT2 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Sh3rf2Q8BZT2 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Sh3rf2Q8BZT2 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sh3rf2Q8BZT2 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sh3rf2Q8BZT2 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sh3rf2Q8BZT2 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Sh3rf2Q8BZT2 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Sh3rf2Q8BZT2 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Sh3rf2Q8BZT2 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sh3rf2Q8BZT2 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sh3rf2Q8BZT2 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sh3rf2Q8BZT2 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sh3rf2Q8BZT2 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sh3rf2Q8BZT2 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sh3rf2Q8BZT2 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Sh3rf2Q8BZT2 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Sh3rf2Q8BZT2 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Sh3rf2Q8BZT2 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.37
Sh3rf2Q8BZT2 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Sh3rf2Q8BZT2 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Sh3rf2Q8BZT2 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Sh3rf2Q8BZT2 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Sh3rf2Q8BZT2 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sh3rf2Q8BZT2 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sh3rf2Q8BZT2 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sh3rf2Q8BZT2 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sh3rf2Q8BZT2 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sh3rf2Q8BZT2 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sh3rf2Q8BZT2 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Sh3rf2Q8BZT2 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Sh3rf2Q8BZT2 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Sh3rf2Q8BZT2 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sh3rf2Q8BZT2 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sh3rf2Q8BZT2 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Sh3rf2Q8BZT2 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sh3rf2Q8BZT2 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Sh3rf2Q8BZT2 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.32■□□□□ 0.36
Sh3rf2Q8BZT2 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Sh3rf2Q8BZT2 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sh3rf2Q8BZT2 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Sh3rf2Q8BZT2 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
Sh3rf2Q8BZT2 Gm37722-201ENSMUST00000193757 208 ntBASIC17.32■□□□□ 0.36
Sh3rf2Q8BZT2 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC17.32■□□□□ 0.36
Sh3rf2Q8BZT2 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sh3rf2Q8BZT2 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sh3rf2Q8BZT2 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sh3rf2Q8BZT2 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sh3rf2Q8BZT2 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sh3rf2Q8BZT2 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.32■□□□□ 0.36
Sh3rf2Q8BZT2 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Sh3rf2Q8BZT2 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sh3rf2Q8BZT2 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sh3rf2Q8BZT2 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
Sh3rf2Q8BZT2 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sh3rf2Q8BZT2 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sh3rf2Q8BZT2 Gm9103-201ENSMUST00000119371 405 ntBASIC17.31■□□□□ 0.36
Sh3rf2Q8BZT2 Gm27000-201ENSMUST00000182943 842 ntBASIC17.31■□□□□ 0.36
Sh3rf2Q8BZT2 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sh3rf2Q8BZT2 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sh3rf2Q8BZT2 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sh3rf2Q8BZT2 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sh3rf2Q8BZT2 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sh3rf2Q8BZT2 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sh3rf2Q8BZT2 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sh3rf2Q8BZT2 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Sh3rf2Q8BZT2 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Sh3rf2Q8BZT2 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sh3rf2Q8BZT2 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sh3rf2Q8BZT2 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sh3rf2Q8BZT2 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC17.3■□□□□ 0.36
Sh3rf2Q8BZT2 Gm11950-201ENSMUST00000121615 838 ntBASIC17.3■□□□□ 0.36
Sh3rf2Q8BZT2 Gm11860-201ENSMUST00000122346 1010 ntBASIC17.3■□□□□ 0.36
Sh3rf2Q8BZT2 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC17.3■□□□□ 0.36
Sh3rf2Q8BZT2 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sh3rf2Q8BZT2 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sh3rf2Q8BZT2 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sh3rf2Q8BZT2 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Sh3rf2Q8BZT2 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Sh3rf2Q8BZT2 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Sh3rf2Q8BZT2 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sh3rf2Q8BZT2 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sh3rf2Q8BZT2 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sh3rf2Q8BZT2 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms