Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cpsf4Q8BQZ5 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Cpsf4Q8BQZ5 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cpsf4Q8BQZ5 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC16.62■□□□□ 0.25
Cpsf4Q8BQZ5 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cpsf4Q8BQZ5 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Cpsf4Q8BQZ5 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Cpsf4Q8BQZ5 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Cpsf4Q8BQZ5 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cpsf4Q8BQZ5 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cpsf4Q8BQZ5 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Cpsf4Q8BQZ5 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC16.61■□□□□ 0.25
Cpsf4Q8BQZ5 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cpsf4Q8BQZ5 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC16.61■□□□□ 0.25
Cpsf4Q8BQZ5 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
Cpsf4Q8BQZ5 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cpsf4Q8BQZ5 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cpsf4Q8BQZ5 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC16.61■□□□□ 0.25
Cpsf4Q8BQZ5 Gm6576-201ENSMUST00000169678 883 ntBASIC16.61■□□□□ 0.25
Cpsf4Q8BQZ5 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Cpsf4Q8BQZ5 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Cpsf4Q8BQZ5 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cpsf4Q8BQZ5 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC16.61■□□□□ 0.25
Cpsf4Q8BQZ5 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Cpsf4Q8BQZ5 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cpsf4Q8BQZ5 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Cpsf4Q8BQZ5 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Cpsf4Q8BQZ5 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cpsf4Q8BQZ5 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
Cpsf4Q8BQZ5 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Cpsf4Q8BQZ5 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cpsf4Q8BQZ5 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cpsf4Q8BQZ5 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cpsf4Q8BQZ5 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cpsf4Q8BQZ5 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Cpsf4Q8BQZ5 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC16.6■□□□□ 0.25
Cpsf4Q8BQZ5 Gm715-201ENSMUST00000117865 831 ntBASIC16.6■□□□□ 0.25
Cpsf4Q8BQZ5 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC16.6■□□□□ 0.25
Cpsf4Q8BQZ5 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC16.6■□□□□ 0.25
Cpsf4Q8BQZ5 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Cpsf4Q8BQZ5 AC175538.1-201ENSMUST00000225343 1269 ntBASIC16.6■□□□□ 0.25
Cpsf4Q8BQZ5 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cpsf4Q8BQZ5 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cpsf4Q8BQZ5 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cpsf4Q8BQZ5 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cpsf4Q8BQZ5 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC16.6■□□□□ 0.25
Cpsf4Q8BQZ5 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cpsf4Q8BQZ5 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Cpsf4Q8BQZ5 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC16.59■□□□□ 0.25
Cpsf4Q8BQZ5 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cpsf4Q8BQZ5 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Cpsf4Q8BQZ5 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Cpsf4Q8BQZ5 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Cpsf4Q8BQZ5 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC16.59■□□□□ 0.25
Cpsf4Q8BQZ5 Gm29241-201ENSMUST00000189260 1096 ntBASIC16.59■□□□□ 0.25
Cpsf4Q8BQZ5 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Cpsf4Q8BQZ5 AC166341.7-201ENSMUST00000221698 126 ntBASIC16.59■□□□□ 0.25
Cpsf4Q8BQZ5 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Cpsf4Q8BQZ5 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Cpsf4Q8BQZ5 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC16.59■□□□□ 0.25
Cpsf4Q8BQZ5 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cpsf4Q8BQZ5 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cpsf4Q8BQZ5 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cpsf4Q8BQZ5 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cpsf4Q8BQZ5 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cpsf4Q8BQZ5 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Cpsf4Q8BQZ5 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Cpsf4Q8BQZ5 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Cpsf4Q8BQZ5 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Cpsf4Q8BQZ5 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC16.58■□□□□ 0.25
Cpsf4Q8BQZ5 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Cpsf4Q8BQZ5 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Cpsf4Q8BQZ5 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Cpsf4Q8BQZ5 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC16.58■□□□□ 0.24
Cpsf4Q8BQZ5 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Cpsf4Q8BQZ5 Mir6982-201ENSMUST00000184354 68 ntBASIC16.58■□□□□ 0.24
Cpsf4Q8BQZ5 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC16.58■□□□□ 0.24
Cpsf4Q8BQZ5 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC16.58■□□□□ 0.24
Cpsf4Q8BQZ5 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Cpsf4Q8BQZ5 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cpsf4Q8BQZ5 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cpsf4Q8BQZ5 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cpsf4Q8BQZ5 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Cpsf4Q8BQZ5 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Cpsf4Q8BQZ5 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cpsf4Q8BQZ5 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Cpsf4Q8BQZ5 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cpsf4Q8BQZ5 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Cpsf4Q8BQZ5 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC16.58■□□□□ 0.24
Cpsf4Q8BQZ5 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Cpsf4Q8BQZ5 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cpsf4Q8BQZ5 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cpsf4Q8BQZ5 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC16.57■□□□□ 0.24
Cpsf4Q8BQZ5 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Cpsf4Q8BQZ5 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cpsf4Q8BQZ5 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC16.57■□□□□ 0.24
Cpsf4Q8BQZ5 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Cpsf4Q8BQZ5 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cpsf4Q8BQZ5 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC16.57■□□□□ 0.24
Cpsf4Q8BQZ5 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC16.57■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms