Protein–RNA interactions for Protein: Q80XU3

Nucks1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, mousemouse

Known RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nucks1Q80XU3 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nucks1Q80XU3 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Nucks1Q80XU3 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Nucks1Q80XU3 Nrn1-203ENSMUST00000223611 1443 ntBASIC18.32■□□□□ 0.52
Nucks1Q80XU3 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nucks1Q80XU3 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nucks1Q80XU3 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Nucks1Q80XU3 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Nucks1Q80XU3 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nucks1Q80XU3 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nucks1Q80XU3 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Nucks1Q80XU3 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Nucks1Q80XU3 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC18.31■□□□□ 0.52
Nucks1Q80XU3 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC18.31■□□□□ 0.52
Nucks1Q80XU3 Gm37856-201ENSMUST00000191634 999 ntBASIC18.31■□□□□ 0.52
Nucks1Q80XU3 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC18.31■□□□□ 0.52
Nucks1Q80XU3 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nucks1Q80XU3 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nucks1Q80XU3 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Nucks1Q80XU3 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nucks1Q80XU3 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nucks1Q80XU3 Gm45244-201ENSMUST00000211328 2200 ntBASIC18.3■□□□□ 0.52
Nucks1Q80XU3 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nucks1Q80XU3 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nucks1Q80XU3 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Nucks1Q80XU3 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Nucks1Q80XU3 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC18.3■□□□□ 0.52
Nucks1Q80XU3 H2-K2-201ENSMUST00000174250 1049 ntBASIC18.3■□□□□ 0.52
Nucks1Q80XU3 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC18.3■□□□□ 0.52
Nucks1Q80XU3 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nucks1Q80XU3 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nucks1Q80XU3 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Nucks1Q80XU3 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nucks1Q80XU3 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Nucks1Q80XU3 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Nucks1Q80XU3 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
Nucks1Q80XU3 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nucks1Q80XU3 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nucks1Q80XU3 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Nucks1Q80XU3 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nucks1Q80XU3 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Nucks1Q80XU3 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nucks1Q80XU3 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nucks1Q80XU3 Gm10517-202ENSMUST00000192970 758 ntBASIC18.29■□□□□ 0.52
Nucks1Q80XU3 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nucks1Q80XU3 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nucks1Q80XU3 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nucks1Q80XU3 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nucks1Q80XU3 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nucks1Q80XU3 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Nucks1Q80XU3 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nucks1Q80XU3 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nucks1Q80XU3 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nucks1Q80XU3 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Nucks1Q80XU3 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Nucks1Q80XU3 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Nucks1Q80XU3 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nucks1Q80XU3 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nucks1Q80XU3 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nucks1Q80XU3 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC18.28■□□□□ 0.52
Nucks1Q80XU3 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nucks1Q80XU3 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC18.28■□□□□ 0.52
Nucks1Q80XU3 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nucks1Q80XU3 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nucks1Q80XU3 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nucks1Q80XU3 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nucks1Q80XU3 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nucks1Q80XU3 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Nucks1Q80XU3 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Nucks1Q80XU3 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Nucks1Q80XU3 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Nucks1Q80XU3 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Nucks1Q80XU3 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Nucks1Q80XU3 Gm12527-201ENSMUST00000117967 564 ntBASIC18.27■□□□□ 0.52
Nucks1Q80XU3 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC18.27■□□□□ 0.52
Nucks1Q80XU3 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Nucks1Q80XU3 Gm44878-201ENSMUST00000205812 1295 ntBASIC18.27■□□□□ 0.52
Nucks1Q80XU3 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC18.27■□□□□ 0.52
Nucks1Q80XU3 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Nucks1Q80XU3 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Nucks1Q80XU3 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Nucks1Q80XU3 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Nucks1Q80XU3 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC18.27■□□□□ 0.52
Nucks1Q80XU3 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
Nucks1Q80XU3 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nucks1Q80XU3 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nucks1Q80XU3 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nucks1Q80XU3 Tfap2a-209ENSMUST00000225180 1828 ntBASIC18.26■□□□□ 0.51
Nucks1Q80XU3 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC18.26■□□□□ 0.51
Nucks1Q80XU3 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nucks1Q80XU3 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC18.26■□□□□ 0.51
Nucks1Q80XU3 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC18.26■□□□□ 0.51
Nucks1Q80XU3 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Nucks1Q80XU3 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nucks1Q80XU3 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nucks1Q80XU3 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Nucks1Q80XU3 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nucks1Q80XU3 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nucks1Q80XU3 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Nucks1Q80XU3 Gm43183-201ENSMUST00000200632 547 ntBASIC18.25■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms