Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc116Q80X53 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc116Q80X53 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc116Q80X53 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc116Q80X53 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Ccdc116Q80X53 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc116Q80X53 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc116Q80X53 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc116Q80X53 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc116Q80X53 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc116Q80X53 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc116Q80X53 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc116Q80X53 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Ccdc116Q80X53 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc116Q80X53 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc116Q80X53 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc116Q80X53 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc116Q80X53 Gm7712-202ENSMUST00000222331 1510 ntBASIC16.71■□□□□ 0.27
Ccdc116Q80X53 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Ccdc116Q80X53 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc116Q80X53 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc116Q80X53 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Ccdc116Q80X53 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc116Q80X53 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC16.71■□□□□ 0.27
Ccdc116Q80X53 Gm13168-201ENSMUST00000121771 632 ntBASIC16.71■□□□□ 0.27
Ccdc116Q80X53 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc116Q80X53 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc116Q80X53 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Ccdc116Q80X53 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc116Q80X53 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
Ccdc116Q80X53 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc116Q80X53 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc116Q80X53 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc116Q80X53 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.26
Ccdc116Q80X53 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Ccdc116Q80X53 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc116Q80X53 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC16.7■□□□□ 0.26
Ccdc116Q80X53 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc116Q80X53 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc116Q80X53 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc116Q80X53 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc116Q80X53 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Ccdc116Q80X53 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc116Q80X53 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Ccdc116Q80X53 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc116Q80X53 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc116Q80X53 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc116Q80X53 Gm17661-201ENSMUST00000170317 270 ntBASIC16.7■□□□□ 0.26
Ccdc116Q80X53 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc116Q80X53 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC16.7■□□□□ 0.26
Ccdc116Q80X53 Gm5297-201ENSMUST00000198555 1171 ntBASIC16.7■□□□□ 0.26
Ccdc116Q80X53 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.7■□□□□ 0.26
Ccdc116Q80X53 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc116Q80X53 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc116Q80X53 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc116Q80X53 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
Ccdc116Q80X53 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc116Q80X53 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc116Q80X53 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc116Q80X53 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc116Q80X53 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc116Q80X53 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc116Q80X53 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC16.69■□□□□ 0.26
Ccdc116Q80X53 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc116Q80X53 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc116Q80X53 Gm36858-201ENSMUST00000194501 2391 ntBASIC16.69■□□□□ 0.26
Ccdc116Q80X53 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc116Q80X53 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc116Q80X53 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC16.69■□□□□ 0.26
Ccdc116Q80X53 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc116Q80X53 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc116Q80X53 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc116Q80X53 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc116Q80X53 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc116Q80X53 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc116Q80X53 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc116Q80X53 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc116Q80X53 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc116Q80X53 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
Ccdc116Q80X53 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc116Q80X53 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc116Q80X53 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc116Q80X53 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Ccdc116Q80X53 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Ccdc116Q80X53 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc116Q80X53 Gm12085-201ENSMUST00000119263 940 ntBASIC16.68■□□□□ 0.26
Ccdc116Q80X53 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc116Q80X53 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc116Q80X53 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc116Q80X53 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Ccdc116Q80X53 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc116Q80X53 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc116Q80X53 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc116Q80X53 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc116Q80X53 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc116Q80X53 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC16.67■□□□□ 0.26
Ccdc116Q80X53 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc116Q80X53 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc116Q80X53 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc116Q80X53 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC16.67■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms