Protein–RNA interactions for Protein: Q80WG7

Trim36, E3 ubiquitin-protein ligase Trim36, mousemouse

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim36Q80WG7 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC16.53■□□□□ 0.24
Trim36Q80WG7 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC16.53■□□□□ 0.24
Trim36Q80WG7 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim36Q80WG7 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Trim36Q80WG7 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Trim36Q80WG7 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Trim36Q80WG7 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Trim36Q80WG7 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Trim36Q80WG7 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC16.53■□□□□ 0.24
Trim36Q80WG7 Wnt10b-205ENSMUST00000226846 1204 ntBASIC16.53■□□□□ 0.24
Trim36Q80WG7 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Trim36Q80WG7 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim36Q80WG7 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC16.53■□□□□ 0.24
Trim36Q80WG7 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trim36Q80WG7 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim36Q80WG7 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim36Q80WG7 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim36Q80WG7 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim36Q80WG7 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim36Q80WG7 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim36Q80WG7 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim36Q80WG7 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim36Q80WG7 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim36Q80WG7 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim36Q80WG7 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim36Q80WG7 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim36Q80WG7 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC16.52■□□□□ 0.24
Trim36Q80WG7 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC16.52■□□□□ 0.24
Trim36Q80WG7 Gm15847-201ENSMUST00000121417 1065 ntBASIC16.52■□□□□ 0.24
Trim36Q80WG7 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC16.52■□□□□ 0.24
Trim36Q80WG7 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC16.52■□□□□ 0.24
Trim36Q80WG7 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Trim36Q80WG7 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Trim36Q80WG7 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim36Q80WG7 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Trim36Q80WG7 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim36Q80WG7 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC16.52■□□□□ 0.23
Trim36Q80WG7 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC16.51■□□□□ 0.23
Trim36Q80WG7 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim36Q80WG7 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim36Q80WG7 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim36Q80WG7 Gm7292-201ENSMUST00000194706 2527 ntBASIC16.51■□□□□ 0.23
Trim36Q80WG7 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim36Q80WG7 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim36Q80WG7 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Trim36Q80WG7 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trim36Q80WG7 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trim36Q80WG7 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim36Q80WG7 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim36Q80WG7 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim36Q80WG7 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim36Q80WG7 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC16.51■□□□□ 0.23
Trim36Q80WG7 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim36Q80WG7 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim36Q80WG7 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim36Q80WG7 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim36Q80WG7 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim36Q80WG7 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC16.51■□□□□ 0.23
Trim36Q80WG7 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim36Q80WG7 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim36Q80WG7 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Trim36Q80WG7 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Trim36Q80WG7 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trim36Q80WG7 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Trim36Q80WG7 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trim36Q80WG7 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim36Q80WG7 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim36Q80WG7 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim36Q80WG7 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim36Q80WG7 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC16.5■□□□□ 0.23
Trim36Q80WG7 Gm10698-201ENSMUST00000182663 604 ntBASIC16.5■□□□□ 0.23
Trim36Q80WG7 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim36Q80WG7 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trim36Q80WG7 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim36Q80WG7 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim36Q80WG7 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim36Q80WG7 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Trim36Q80WG7 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC16.5■□□□□ 0.23
Trim36Q80WG7 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim36Q80WG7 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim36Q80WG7 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim36Q80WG7 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim36Q80WG7 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim36Q80WG7 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim36Q80WG7 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim36Q80WG7 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim36Q80WG7 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim36Q80WG7 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim36Q80WG7 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC16.49■□□□□ 0.23
Trim36Q80WG7 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC16.49■□□□□ 0.23
Trim36Q80WG7 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim36Q80WG7 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Trim36Q80WG7 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim36Q80WG7 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trim36Q80WG7 Mir6982-201ENSMUST00000184354 68 ntBASIC16.49■□□□□ 0.23
Trim36Q80WG7 Gm18666-201ENSMUST00000190039 958 ntBASIC16.49■□□□□ 0.23
Trim36Q80WG7 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trim36Q80WG7 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Trim36Q80WG7 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim36Q80WG7 Nrn1-203ENSMUST00000223611 1443 ntBASIC16.49■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms