Protein–RNA interactions for Protein: Q7M6Y2

Sox11, Transcription factor SOX-11, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox11Q7M6Y2 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sox11Q7M6Y2 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sox11Q7M6Y2 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC17.3■□□□□ 0.36
Sox11Q7M6Y2 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
Sox11Q7M6Y2 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Sox11Q7M6Y2 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Sox11Q7M6Y2 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sox11Q7M6Y2 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sox11Q7M6Y2 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sox11Q7M6Y2 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Sox11Q7M6Y2 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Sox11Q7M6Y2 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sox11Q7M6Y2 Gm29791-202ENSMUST00000207888 369 ntBASIC17.29■□□□□ 0.36
Sox11Q7M6Y2 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sox11Q7M6Y2 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.29■□□□□ 0.36
Sox11Q7M6Y2 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC17.28■□□□□ 0.36
Sox11Q7M6Y2 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sox11Q7M6Y2 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.28■□□□□ 0.36
Sox11Q7M6Y2 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Sox11Q7M6Y2 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sox11Q7M6Y2 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Sox11Q7M6Y2 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sox11Q7M6Y2 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sox11Q7M6Y2 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.28■□□□□ 0.36
Sox11Q7M6Y2 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Sox11Q7M6Y2 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Sox11Q7M6Y2 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC17.28■□□□□ 0.36
Sox11Q7M6Y2 Gm45328-201ENSMUST00000210942 917 ntBASIC17.28■□□□□ 0.36
Sox11Q7M6Y2 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sox11Q7M6Y2 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Sox11Q7M6Y2 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sox11Q7M6Y2 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sox11Q7M6Y2 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sox11Q7M6Y2 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sox11Q7M6Y2 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sox11Q7M6Y2 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC17.28■□□□□ 0.36
Sox11Q7M6Y2 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Sox11Q7M6Y2 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.28■□□□□ 0.36
Sox11Q7M6Y2 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sox11Q7M6Y2 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sox11Q7M6Y2 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Sox11Q7M6Y2 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.27■□□□□ 0.36
Sox11Q7M6Y2 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Sox11Q7M6Y2 Gm38308-201ENSMUST00000194934 1809 ntBASIC17.27■□□□□ 0.36
Sox11Q7M6Y2 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC17.27■□□□□ 0.36
Sox11Q7M6Y2 Gm11860-201ENSMUST00000122346 1010 ntBASIC17.27■□□□□ 0.36
Sox11Q7M6Y2 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC17.27■□□□□ 0.36
Sox11Q7M6Y2 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sox11Q7M6Y2 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sox11Q7M6Y2 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sox11Q7M6Y2 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Sox11Q7M6Y2 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.35
Sox11Q7M6Y2 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Sox11Q7M6Y2 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Sox11Q7M6Y2 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Sox11Q7M6Y2 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Sox11Q7M6Y2 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.26■□□□□ 0.35
Sox11Q7M6Y2 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sox11Q7M6Y2 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sox11Q7M6Y2 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Sox11Q7M6Y2 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Sox11Q7M6Y2 Gm24589-201ENSMUST00000116692 94 ntBASIC17.26■□□□□ 0.35
Sox11Q7M6Y2 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Sox11Q7M6Y2 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sox11Q7M6Y2 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC17.26■□□□□ 0.35
Sox11Q7M6Y2 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Sox11Q7M6Y2 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Sox11Q7M6Y2 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Sox11Q7M6Y2 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sox11Q7M6Y2 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sox11Q7M6Y2 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Sox11Q7M6Y2 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sox11Q7M6Y2 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.26■□□□□ 0.35
Sox11Q7M6Y2 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Sox11Q7M6Y2 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Sox11Q7M6Y2 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Sox11Q7M6Y2 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sox11Q7M6Y2 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sox11Q7M6Y2 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sox11Q7M6Y2 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sox11Q7M6Y2 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sox11Q7M6Y2 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sox11Q7M6Y2 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sox11Q7M6Y2 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC17.24■□□□□ 0.35
Sox11Q7M6Y2 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sox11Q7M6Y2 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sox11Q7M6Y2 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Sox11Q7M6Y2 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sox11Q7M6Y2 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Sox11Q7M6Y2 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Sox11Q7M6Y2 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sox11Q7M6Y2 Gm6623-201ENSMUST00000173570 544 ntBASIC17.24■□□□□ 0.35
Sox11Q7M6Y2 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Sox11Q7M6Y2 Ighv6-1-201ENSMUST00000193612 343 ntBASIC17.24■□□□□ 0.35
Sox11Q7M6Y2 Gm43514-201ENSMUST00000198852 424 ntBASIC17.24■□□□□ 0.35
Sox11Q7M6Y2 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Sox11Q7M6Y2 Mzt1-203ENSMUST00000227948 952 ntBASIC17.24■□□□□ 0.35
Sox11Q7M6Y2 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sox11Q7M6Y2 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sox11Q7M6Y2 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms