Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ddx55Q6ZPL9 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC19.48■□□□□ 0.71
Ddx55Q6ZPL9 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ddx55Q6ZPL9 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ddx55Q6ZPL9 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Ddx55Q6ZPL9 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ddx55Q6ZPL9 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ddx55Q6ZPL9 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ddx55Q6ZPL9 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ddx55Q6ZPL9 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ddx55Q6ZPL9 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ddx55Q6ZPL9 Gm6190-201ENSMUST00000220683 1374 ntBASIC19.47■□□□□ 0.71
Ddx55Q6ZPL9 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ddx55Q6ZPL9 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ddx55Q6ZPL9 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC19.47■□□□□ 0.71
Ddx55Q6ZPL9 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC19.47■□□□□ 0.71
Ddx55Q6ZPL9 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Ddx55Q6ZPL9 Gm9449-201ENSMUST00000207265 1011 ntBASIC19.47■□□□□ 0.71
Ddx55Q6ZPL9 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC19.47■□□□□ 0.71
Ddx55Q6ZPL9 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Ddx55Q6ZPL9 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Ddx55Q6ZPL9 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Ddx55Q6ZPL9 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ddx55Q6ZPL9 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ddx55Q6ZPL9 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ddx55Q6ZPL9 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ddx55Q6ZPL9 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ddx55Q6ZPL9 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ddx55Q6ZPL9 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ddx55Q6ZPL9 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ddx55Q6ZPL9 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Ddx55Q6ZPL9 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ddx55Q6ZPL9 Gm12644-201ENSMUST00000119935 606 ntBASIC19.46■□□□□ 0.71
Ddx55Q6ZPL9 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ddx55Q6ZPL9 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ddx55Q6ZPL9 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC19.46■□□□□ 0.71
Ddx55Q6ZPL9 Gm5712-201ENSMUST00000199748 1043 ntBASIC19.46■□□□□ 0.71
Ddx55Q6ZPL9 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ddx55Q6ZPL9 AC108846.1-201ENSMUST00000214531 513 ntBASIC19.46■□□□□ 0.71
Ddx55Q6ZPL9 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ddx55Q6ZPL9 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ddx55Q6ZPL9 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ddx55Q6ZPL9 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ddx55Q6ZPL9 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ddx55Q6ZPL9 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ddx55Q6ZPL9 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
Ddx55Q6ZPL9 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC19.46■□□□□ 0.71
Ddx55Q6ZPL9 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Ddx55Q6ZPL9 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ddx55Q6ZPL9 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Ddx55Q6ZPL9 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ddx55Q6ZPL9 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ddx55Q6ZPL9 AC153794.1-201ENSMUST00000169148 126 ntBASIC19.45■□□□□ 0.7
Ddx55Q6ZPL9 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Ddx55Q6ZPL9 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC19.45■□□□□ 0.7
Ddx55Q6ZPL9 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC19.45■□□□□ 0.7
Ddx55Q6ZPL9 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Ddx55Q6ZPL9 Rps4l-201ENSMUST00000071745 943 ntBASIC19.45■□□□□ 0.7
Ddx55Q6ZPL9 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC19.45■□□□□ 0.7
Ddx55Q6ZPL9 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Ddx55Q6ZPL9 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ddx55Q6ZPL9 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Ddx55Q6ZPL9 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ddx55Q6ZPL9 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ddx55Q6ZPL9 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ddx55Q6ZPL9 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ddx55Q6ZPL9 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ddx55Q6ZPL9 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ddx55Q6ZPL9 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC19.44■□□□□ 0.7
Ddx55Q6ZPL9 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ddx55Q6ZPL9 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC19.44■□□□□ 0.7
Ddx55Q6ZPL9 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC19.44■□□□□ 0.7
Ddx55Q6ZPL9 Gm29707-201ENSMUST00000196325 491 ntBASIC19.44■□□□□ 0.7
Ddx55Q6ZPL9 Gm18206-201ENSMUST00000207027 926 ntBASIC19.44■□□□□ 0.7
Ddx55Q6ZPL9 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC19.44■□□□□ 0.7
Ddx55Q6ZPL9 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ddx55Q6ZPL9 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ddx55Q6ZPL9 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ddx55Q6ZPL9 Wnt10b-204ENSMUST00000226655 1807 ntBASIC19.44■□□□□ 0.7
Ddx55Q6ZPL9 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ddx55Q6ZPL9 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ddx55Q6ZPL9 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ddx55Q6ZPL9 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Ddx55Q6ZPL9 AC161829.1-201ENSMUST00000220298 281 ntBASIC19.43■□□□□ 0.7
Ddx55Q6ZPL9 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ddx55Q6ZPL9 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Ddx55Q6ZPL9 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC19.42■□□□□ 0.7
Ddx55Q6ZPL9 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ddx55Q6ZPL9 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ddx55Q6ZPL9 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ddx55Q6ZPL9 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ddx55Q6ZPL9 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC19.42■□□□□ 0.7
Ddx55Q6ZPL9 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ddx55Q6ZPL9 Gm13312-201ENSMUST00000119631 718 ntBASIC19.42■□□□□ 0.7
Ddx55Q6ZPL9 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Ddx55Q6ZPL9 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ddx55Q6ZPL9 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC19.42■□□□□ 0.7
Ddx55Q6ZPL9 AC125311.2-201ENSMUST00000227477 1940 ntBASIC19.42■□□□□ 0.7
Ddx55Q6ZPL9 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC19.42■□□□□ 0.7
Ddx55Q6ZPL9 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms