Protein–RNA interactions for Protein: Q6TDU8

Casc1, Protein CASC1, mousemouse

Predictions only

Length 730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc1Q6TDU8 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Casc1Q6TDU8 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Casc1Q6TDU8 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Casc1Q6TDU8 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Casc1Q6TDU8 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC20.42■□□□□ 0.86
Casc1Q6TDU8 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Casc1Q6TDU8 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
Casc1Q6TDU8 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Casc1Q6TDU8 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Casc1Q6TDU8 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Casc1Q6TDU8 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Casc1Q6TDU8 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Casc1Q6TDU8 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Casc1Q6TDU8 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Casc1Q6TDU8 Gm45560-201ENSMUST00000211492 1472 ntBASIC20.42■□□□□ 0.86
Casc1Q6TDU8 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Casc1Q6TDU8 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Casc1Q6TDU8 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Casc1Q6TDU8 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC20.42■□□□□ 0.86
Casc1Q6TDU8 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC20.42■□□□□ 0.86
Casc1Q6TDU8 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Casc1Q6TDU8 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Casc1Q6TDU8 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Casc1Q6TDU8 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Casc1Q6TDU8 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Casc1Q6TDU8 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Casc1Q6TDU8 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC20.41■□□□□ 0.86
Casc1Q6TDU8 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Casc1Q6TDU8 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Casc1Q6TDU8 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Casc1Q6TDU8 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Casc1Q6TDU8 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Casc1Q6TDU8 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC20.41■□□□□ 0.86
Casc1Q6TDU8 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Casc1Q6TDU8 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Casc1Q6TDU8 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC20.4■□□□□ 0.86
Casc1Q6TDU8 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Casc1Q6TDU8 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
Casc1Q6TDU8 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Casc1Q6TDU8 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Casc1Q6TDU8 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Casc1Q6TDU8 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC20.4■□□□□ 0.86
Casc1Q6TDU8 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC20.4■□□□□ 0.86
Casc1Q6TDU8 Cxcl14-202ENSMUST00000224801 1467 ntBASIC20.4■□□□□ 0.86
Casc1Q6TDU8 Idnk-204ENSMUST00000226010 1898 ntBASIC20.4■□□□□ 0.86
Casc1Q6TDU8 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Casc1Q6TDU8 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Casc1Q6TDU8 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Casc1Q6TDU8 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Casc1Q6TDU8 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Casc1Q6TDU8 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Casc1Q6TDU8 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Casc1Q6TDU8 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Casc1Q6TDU8 Gm15743-202ENSMUST00000182690 1901 ntBASIC20.39■□□□□ 0.86
Casc1Q6TDU8 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC20.39■□□□□ 0.85
Casc1Q6TDU8 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Casc1Q6TDU8 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Casc1Q6TDU8 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Casc1Q6TDU8 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC20.39■□□□□ 0.85
Casc1Q6TDU8 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Casc1Q6TDU8 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Casc1Q6TDU8 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC20.39■□□□□ 0.85
Casc1Q6TDU8 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Casc1Q6TDU8 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Casc1Q6TDU8 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Casc1Q6TDU8 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Casc1Q6TDU8 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC20.38■□□□□ 0.85
Casc1Q6TDU8 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Casc1Q6TDU8 Gm13181-201ENSMUST00000120117 1069 ntBASIC20.38■□□□□ 0.85
Casc1Q6TDU8 Mir6349-201ENSMUST00000184059 97 ntBASIC20.38■□□□□ 0.85
Casc1Q6TDU8 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC20.38■□□□□ 0.85
Casc1Q6TDU8 AC154649.1-201ENSMUST00000227392 384 ntBASIC20.38■□□□□ 0.85
Casc1Q6TDU8 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Casc1Q6TDU8 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Casc1Q6TDU8 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Casc1Q6TDU8 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC20.38■□□□□ 0.85
Casc1Q6TDU8 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Casc1Q6TDU8 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Casc1Q6TDU8 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Casc1Q6TDU8 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Casc1Q6TDU8 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC20.38■□□□□ 0.85
Casc1Q6TDU8 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Casc1Q6TDU8 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Casc1Q6TDU8 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Casc1Q6TDU8 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC20.37■□□□□ 0.85
Casc1Q6TDU8 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Casc1Q6TDU8 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Casc1Q6TDU8 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
Casc1Q6TDU8 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC20.37■□□□□ 0.85
Casc1Q6TDU8 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC20.37■□□□□ 0.85
Casc1Q6TDU8 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Casc1Q6TDU8 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Casc1Q6TDU8 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Casc1Q6TDU8 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
Casc1Q6TDU8 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Casc1Q6TDU8 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Casc1Q6TDU8 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Casc1Q6TDU8 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Casc1Q6TDU8 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Casc1Q6TDU8 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms