Protein–RNA interactions for Protein: Q6T3U4

Npc1l1, Niemann-Pick C1-like protein 1, mousemouse

Predictions only

Length 1,333 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1l1Q6T3U4 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Npc1l1Q6T3U4 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Npc1l1Q6T3U4 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Npc1l1Q6T3U4 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Npc1l1Q6T3U4 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC20.48■□□□□ 0.87
Npc1l1Q6T3U4 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Npc1l1Q6T3U4 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Npc1l1Q6T3U4 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Npc1l1Q6T3U4 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Npc1l1Q6T3U4 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC20.48■□□□□ 0.87
Npc1l1Q6T3U4 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Npc1l1Q6T3U4 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Npc1l1Q6T3U4 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC20.48■□□□□ 0.87
Npc1l1Q6T3U4 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Npc1l1Q6T3U4 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Npc1l1Q6T3U4 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Npc1l1Q6T3U4 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Npc1l1Q6T3U4 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Npc1l1Q6T3U4 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC20.48■□□□□ 0.87
Npc1l1Q6T3U4 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Npc1l1Q6T3U4 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Npc1l1Q6T3U4 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
Npc1l1Q6T3U4 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Npc1l1Q6T3U4 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Npc1l1Q6T3U4 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Npc1l1Q6T3U4 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Npc1l1Q6T3U4 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Npc1l1Q6T3U4 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Npc1l1Q6T3U4 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Npc1l1Q6T3U4 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC20.47■□□□□ 0.87
Npc1l1Q6T3U4 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Npc1l1Q6T3U4 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Npc1l1Q6T3U4 Gm9013-201ENSMUST00000132939 882 ntBASIC20.47■□□□□ 0.87
Npc1l1Q6T3U4 Gm18958-201ENSMUST00000174258 762 ntBASIC20.47■□□□□ 0.87
Npc1l1Q6T3U4 Gm27000-201ENSMUST00000182943 842 ntBASIC20.47■□□□□ 0.87
Npc1l1Q6T3U4 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC20.47■□□□□ 0.87
Npc1l1Q6T3U4 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Npc1l1Q6T3U4 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Npc1l1Q6T3U4 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
Npc1l1Q6T3U4 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Npc1l1Q6T3U4 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Npc1l1Q6T3U4 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC20.46■□□□□ 0.87
Npc1l1Q6T3U4 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Npc1l1Q6T3U4 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Npc1l1Q6T3U4 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Npc1l1Q6T3U4 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Npc1l1Q6T3U4 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Npc1l1Q6T3U4 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Npc1l1Q6T3U4 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Npc1l1Q6T3U4 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Npc1l1Q6T3U4 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Npc1l1Q6T3U4 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC20.46■□□□□ 0.87
Npc1l1Q6T3U4 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC20.46■□□□□ 0.87
Npc1l1Q6T3U4 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC20.46■□□□□ 0.87
Npc1l1Q6T3U4 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Npc1l1Q6T3U4 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Npc1l1Q6T3U4 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Npc1l1Q6T3U4 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Npc1l1Q6T3U4 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Npc1l1Q6T3U4 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Npc1l1Q6T3U4 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Npc1l1Q6T3U4 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Npc1l1Q6T3U4 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Npc1l1Q6T3U4 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Npc1l1Q6T3U4 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Npc1l1Q6T3U4 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Npc1l1Q6T3U4 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Npc1l1Q6T3U4 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Npc1l1Q6T3U4 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Npc1l1Q6T3U4 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Npc1l1Q6T3U4 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC20.45■□□□□ 0.86
Npc1l1Q6T3U4 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Npc1l1Q6T3U4 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Npc1l1Q6T3U4 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Npc1l1Q6T3U4 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Npc1l1Q6T3U4 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Npc1l1Q6T3U4 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Npc1l1Q6T3U4 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
Npc1l1Q6T3U4 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Npc1l1Q6T3U4 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Npc1l1Q6T3U4 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Npc1l1Q6T3U4 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Npc1l1Q6T3U4 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Npc1l1Q6T3U4 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Npc1l1Q6T3U4 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Npc1l1Q6T3U4 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Npc1l1Q6T3U4 Gm28033-201ENSMUST00000184224 96 ntBASIC20.44■□□□□ 0.86
Npc1l1Q6T3U4 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Npc1l1Q6T3U4 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Npc1l1Q6T3U4 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Npc1l1Q6T3U4 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Npc1l1Q6T3U4 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Npc1l1Q6T3U4 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Npc1l1Q6T3U4 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Npc1l1Q6T3U4 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Npc1l1Q6T3U4 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Npc1l1Q6T3U4 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC20.43■□□□□ 0.86
Npc1l1Q6T3U4 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Npc1l1Q6T3U4 Gm17808-201ENSMUST00000200859 894 ntBASIC20.43■□□□□ 0.86
Npc1l1Q6T3U4 AC130713.1-201ENSMUST00000228853 1096 ntBASIC20.43■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms