Protein–RNA interactions for Protein: Q6PAV2

Herc4, Probable E3 ubiquitin-protein ligase HERC4, mousemouse

Predictions only

Length 1,057 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc4Q6PAV2 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Herc4Q6PAV2 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Herc4Q6PAV2 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Herc4Q6PAV2 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Herc4Q6PAV2 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC18.9■□□□□ 0.62
Herc4Q6PAV2 Gm17661-201ENSMUST00000170317 270 ntBASIC18.9■□□□□ 0.62
Herc4Q6PAV2 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Herc4Q6PAV2 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Herc4Q6PAV2 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC18.9■□□□□ 0.62
Herc4Q6PAV2 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC18.9■□□□□ 0.62
Herc4Q6PAV2 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Herc4Q6PAV2 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
Herc4Q6PAV2 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC18.89■□□□□ 0.62
Herc4Q6PAV2 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Herc4Q6PAV2 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Herc4Q6PAV2 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Herc4Q6PAV2 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Herc4Q6PAV2 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Herc4Q6PAV2 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC18.89■□□□□ 0.61
Herc4Q6PAV2 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC18.89■□□□□ 0.61
Herc4Q6PAV2 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Herc4Q6PAV2 Gm21814-202ENSMUST00000203277 873 ntBASIC18.89■□□□□ 0.61
Herc4Q6PAV2 Gm3375-201ENSMUST00000203929 796 ntBASIC18.89■□□□□ 0.61
Herc4Q6PAV2 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Herc4Q6PAV2 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.61
Herc4Q6PAV2 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Herc4Q6PAV2 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Herc4Q6PAV2 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Herc4Q6PAV2 AC121598.2-201ENSMUST00000228376 2325 ntBASIC18.89■□□□□ 0.61
Herc4Q6PAV2 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC18.89■□□□□ 0.61
Herc4Q6PAV2 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
Herc4Q6PAV2 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Herc4Q6PAV2 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Herc4Q6PAV2 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Herc4Q6PAV2 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Herc4Q6PAV2 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Herc4Q6PAV2 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Herc4Q6PAV2 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Herc4Q6PAV2 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Herc4Q6PAV2 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Herc4Q6PAV2 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
Herc4Q6PAV2 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Herc4Q6PAV2 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Herc4Q6PAV2 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Herc4Q6PAV2 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Herc4Q6PAV2 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Herc4Q6PAV2 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Herc4Q6PAV2 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Herc4Q6PAV2 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Herc4Q6PAV2 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Herc4Q6PAV2 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Herc4Q6PAV2 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Herc4Q6PAV2 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Herc4Q6PAV2 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Herc4Q6PAV2 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC18.87■□□□□ 0.61
Herc4Q6PAV2 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Herc4Q6PAV2 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Herc4Q6PAV2 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Herc4Q6PAV2 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Herc4Q6PAV2 Gm9731-201ENSMUST00000209480 747 ntBASIC18.87■□□□□ 0.61
Herc4Q6PAV2 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC18.87■□□□□ 0.61
Herc4Q6PAV2 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Herc4Q6PAV2 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Herc4Q6PAV2 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Herc4Q6PAV2 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Herc4Q6PAV2 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
Herc4Q6PAV2 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Herc4Q6PAV2 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Herc4Q6PAV2 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Herc4Q6PAV2 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Herc4Q6PAV2 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Herc4Q6PAV2 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Herc4Q6PAV2 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Herc4Q6PAV2 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC18.86■□□□□ 0.61
Herc4Q6PAV2 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Herc4Q6PAV2 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Herc4Q6PAV2 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Herc4Q6PAV2 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
Herc4Q6PAV2 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Herc4Q6PAV2 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC18.86■□□□□ 0.61
Herc4Q6PAV2 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Herc4Q6PAV2 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Herc4Q6PAV2 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Herc4Q6PAV2 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC18.86■□□□□ 0.61
Herc4Q6PAV2 AL672049.1-201ENSMUST00000197943 91 ntBASIC18.86■□□□□ 0.61
Herc4Q6PAV2 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Herc4Q6PAV2 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Herc4Q6PAV2 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Herc4Q6PAV2 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Herc4Q6PAV2 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
Herc4Q6PAV2 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
Herc4Q6PAV2 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Herc4Q6PAV2 Tfap2a-209ENSMUST00000225180 1828 ntBASIC18.86■□□□□ 0.61
Herc4Q6PAV2 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Herc4Q6PAV2 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Herc4Q6PAV2 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Herc4Q6PAV2 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Herc4Q6PAV2 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Herc4Q6PAV2 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Herc4Q6PAV2 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms